Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26835 | 80728;80729;80730 | chr2:178565629;178565628;178565627 | chr2:179430356;179430355;179430354 |
N2AB | 25194 | 75805;75806;75807 | chr2:178565629;178565628;178565627 | chr2:179430356;179430355;179430354 |
N2A | 24267 | 73024;73025;73026 | chr2:178565629;178565628;178565627 | chr2:179430356;179430355;179430354 |
N2B | 17770 | 53533;53534;53535 | chr2:178565629;178565628;178565627 | chr2:179430356;179430355;179430354 |
Novex-1 | 17895 | 53908;53909;53910 | chr2:178565629;178565628;178565627 | chr2:179430356;179430355;179430354 |
Novex-2 | 17962 | 54109;54110;54111 | chr2:178565629;178565628;178565627 | chr2:179430356;179430355;179430354 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1705503390 | None | 0.009 | N | 0.102 | 0.125 | 0.394685799254 | gnomAD-4.0.0 | 1.59161E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77331E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1082 | likely_benign | 0.1119 | benign | -1.101 | Destabilizing | 0.009 | N | 0.102 | neutral | N | 0.438807297 | None | None | I |
V/C | 0.6281 | likely_pathogenic | 0.6532 | pathogenic | -0.708 | Destabilizing | 0.979 | D | 0.353 | neutral | None | None | None | None | I |
V/D | 0.2174 | likely_benign | 0.2213 | benign | -0.701 | Destabilizing | 0.799 | D | 0.372 | neutral | N | 0.433265404 | None | None | I |
V/E | 0.239 | likely_benign | 0.2415 | benign | -0.697 | Destabilizing | 0.46 | N | 0.323 | neutral | None | None | None | None | I |
V/F | 0.1276 | likely_benign | 0.1223 | benign | -0.849 | Destabilizing | 0.955 | D | 0.373 | neutral | N | 0.509150029 | None | None | I |
V/G | 0.1145 | likely_benign | 0.1218 | benign | -1.374 | Destabilizing | 0.69 | D | 0.346 | neutral | N | 0.457547773 | None | None | I |
V/H | 0.4151 | ambiguous | 0.4335 | ambiguous | -0.687 | Destabilizing | 0.996 | D | 0.358 | neutral | None | None | None | None | I |
V/I | 0.0723 | likely_benign | 0.0727 | benign | -0.46 | Destabilizing | 0.094 | N | 0.315 | neutral | N | 0.452141953 | None | None | I |
V/K | 0.3428 | ambiguous | 0.3631 | ambiguous | -0.78 | Destabilizing | 0.65 | D | 0.319 | neutral | None | None | None | None | I |
V/L | 0.1475 | likely_benign | 0.1552 | benign | -0.46 | Destabilizing | 0.049 | N | 0.225 | neutral | N | 0.448101571 | None | None | I |
V/M | 0.1191 | likely_benign | 0.1198 | benign | -0.505 | Destabilizing | 0.984 | D | 0.368 | neutral | None | None | None | None | I |
V/N | 0.117 | likely_benign | 0.13 | benign | -0.661 | Destabilizing | 0.217 | N | 0.348 | neutral | None | None | None | None | I |
V/P | 0.6455 | likely_pathogenic | 0.6523 | pathogenic | -0.639 | Destabilizing | 0.359 | N | 0.329 | neutral | None | None | None | None | I |
V/Q | 0.2759 | likely_benign | 0.2852 | benign | -0.785 | Destabilizing | 0.904 | D | 0.375 | neutral | None | None | None | None | I |
V/R | 0.3505 | ambiguous | 0.3623 | ambiguous | -0.297 | Destabilizing | 0.933 | D | 0.38 | neutral | None | None | None | None | I |
V/S | 0.101 | likely_benign | 0.1073 | benign | -1.152 | Destabilizing | 0.307 | N | 0.308 | neutral | None | None | None | None | I |
V/T | 0.1039 | likely_benign | 0.1075 | benign | -1.03 | Destabilizing | None | N | 0.117 | neutral | None | None | None | None | I |
V/W | 0.7468 | likely_pathogenic | 0.7357 | pathogenic | -0.995 | Destabilizing | 0.999 | D | 0.38 | neutral | None | None | None | None | I |
V/Y | 0.3724 | ambiguous | 0.3783 | ambiguous | -0.686 | Destabilizing | 0.988 | D | 0.362 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.