Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2684 | 8275;8276;8277 | chr2:178771277;178771276;178771275 | chr2:179636004;179636003;179636002 |
N2AB | 2684 | 8275;8276;8277 | chr2:178771277;178771276;178771275 | chr2:179636004;179636003;179636002 |
N2A | 2684 | 8275;8276;8277 | chr2:178771277;178771276;178771275 | chr2:179636004;179636003;179636002 |
N2B | 2638 | 8137;8138;8139 | chr2:178771277;178771276;178771275 | chr2:179636004;179636003;179636002 |
Novex-1 | 2638 | 8137;8138;8139 | chr2:178771277;178771276;178771275 | chr2:179636004;179636003;179636002 |
Novex-2 | 2638 | 8137;8138;8139 | chr2:178771277;178771276;178771275 | chr2:179636004;179636003;179636002 |
Novex-3 | 2684 | 8275;8276;8277 | chr2:178771277;178771276;178771275 | chr2:179636004;179636003;179636002 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs1008197005 | None | 0.801 | N | 0.409 | 0.297 | 0.0884992946249 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 1.20604E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/G | rs1008197005 | None | 0.801 | N | 0.409 | 0.297 | 0.0884992946249 | gnomAD-4.0.0 | 1.02447E-05 | None | None | None | None | N | None | 1.18339E-04 | 1.69492E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1532 | likely_benign | 0.1552 | benign | -0.149 | Destabilizing | 0.051 | N | 0.234 | neutral | N | 0.341972741 | None | None | N |
D/C | 0.6852 | likely_pathogenic | 0.6836 | pathogenic | -0.085 | Destabilizing | 0.998 | D | 0.427 | neutral | None | None | None | None | N |
D/E | 0.1375 | likely_benign | 0.1446 | benign | -0.249 | Destabilizing | 0.012 | N | 0.163 | neutral | N | 0.33315467 | None | None | N |
D/F | 0.6648 | likely_pathogenic | 0.6546 | pathogenic | -0.09 | Destabilizing | 0.991 | D | 0.409 | neutral | None | None | None | None | N |
D/G | 0.1443 | likely_benign | 0.1437 | benign | -0.311 | Destabilizing | 0.801 | D | 0.409 | neutral | N | 0.342227802 | None | None | N |
D/H | 0.2988 | likely_benign | 0.2805 | benign | 0.34 | Stabilizing | 0.966 | D | 0.377 | neutral | N | 0.352309876 | None | None | N |
D/I | 0.3859 | ambiguous | 0.4033 | ambiguous | 0.222 | Stabilizing | 0.974 | D | 0.433 | neutral | None | None | None | None | N |
D/K | 0.3354 | likely_benign | 0.3177 | benign | 0.398 | Stabilizing | 0.728 | D | 0.403 | neutral | None | None | None | None | N |
D/L | 0.4119 | ambiguous | 0.4124 | ambiguous | 0.222 | Stabilizing | 0.842 | D | 0.411 | neutral | None | None | None | None | N |
D/M | 0.6236 | likely_pathogenic | 0.6339 | pathogenic | 0.159 | Stabilizing | 0.998 | D | 0.396 | neutral | None | None | None | None | N |
D/N | 0.1029 | likely_benign | 0.1035 | benign | 0.063 | Stabilizing | 0.801 | D | 0.405 | neutral | N | 0.337106617 | None | None | N |
D/P | 0.637 | likely_pathogenic | 0.6233 | pathogenic | 0.119 | Stabilizing | 0.974 | D | 0.379 | neutral | None | None | None | None | N |
D/Q | 0.3087 | likely_benign | 0.3072 | benign | 0.095 | Stabilizing | 0.172 | N | 0.141 | neutral | None | None | None | None | N |
D/R | 0.3878 | ambiguous | 0.3588 | ambiguous | 0.635 | Stabilizing | 0.949 | D | 0.395 | neutral | None | None | None | None | N |
D/S | 0.1142 | likely_benign | 0.117 | benign | -0.031 | Destabilizing | 0.525 | D | 0.328 | neutral | None | None | None | None | N |
D/T | 0.2113 | likely_benign | 0.2163 | benign | 0.103 | Stabilizing | 0.842 | D | 0.379 | neutral | None | None | None | None | N |
D/V | 0.2403 | likely_benign | 0.2478 | benign | 0.119 | Stabilizing | 0.801 | D | 0.405 | neutral | N | 0.426499834 | None | None | N |
D/W | 0.8788 | likely_pathogenic | 0.8685 | pathogenic | 0.022 | Stabilizing | 0.998 | D | 0.536 | neutral | None | None | None | None | N |
D/Y | 0.3181 | likely_benign | 0.2947 | benign | 0.149 | Stabilizing | 0.989 | D | 0.41 | neutral | N | 0.368036628 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.