Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2685 | 8278;8279;8280 | chr2:178771274;178771273;178771272 | chr2:179636001;179636000;179635999 |
N2AB | 2685 | 8278;8279;8280 | chr2:178771274;178771273;178771272 | chr2:179636001;179636000;179635999 |
N2A | 2685 | 8278;8279;8280 | chr2:178771274;178771273;178771272 | chr2:179636001;179636000;179635999 |
N2B | 2639 | 8140;8141;8142 | chr2:178771274;178771273;178771272 | chr2:179636001;179636000;179635999 |
Novex-1 | 2639 | 8140;8141;8142 | chr2:178771274;178771273;178771272 | chr2:179636001;179636000;179635999 |
Novex-2 | 2639 | 8140;8141;8142 | chr2:178771274;178771273;178771272 | chr2:179636001;179636000;179635999 |
Novex-3 | 2685 | 8278;8279;8280 | chr2:178771274;178771273;178771272 | chr2:179636001;179636000;179635999 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | None | None | 1.0 | D | 0.795 | 0.613 | 0.738525484636 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
D/H | None | None | 1.0 | D | 0.795 | 0.613 | 0.738525484636 | gnomAD-4.0.0 | 6.57194E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46964E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6591 | likely_pathogenic | 0.6816 | pathogenic | 0.134 | Stabilizing | 1.0 | D | 0.808 | deleterious | D | 0.793150483 | None | None | N |
D/C | 0.8915 | likely_pathogenic | 0.908 | pathogenic | 0.138 | Stabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
D/E | 0.5787 | likely_pathogenic | 0.6184 | pathogenic | -0.619 | Destabilizing | 1.0 | D | 0.595 | neutral | D | 0.794314007 | None | None | N |
D/F | 0.918 | likely_pathogenic | 0.9277 | pathogenic | 0.868 | Stabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
D/G | 0.7294 | likely_pathogenic | 0.7357 | pathogenic | -0.328 | Destabilizing | 1.0 | D | 0.777 | deleterious | D | 0.792380202 | None | None | N |
D/H | 0.6164 | likely_pathogenic | 0.6282 | pathogenic | 0.482 | Stabilizing | 1.0 | D | 0.795 | deleterious | D | 0.709520678 | None | None | N |
D/I | 0.8956 | likely_pathogenic | 0.9094 | pathogenic | 1.378 | Stabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
D/K | 0.9182 | likely_pathogenic | 0.9112 | pathogenic | -0.056 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
D/L | 0.8906 | likely_pathogenic | 0.9066 | pathogenic | 1.378 | Stabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
D/M | 0.9197 | likely_pathogenic | 0.9329 | pathogenic | 1.774 | Stabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
D/N | 0.2496 | likely_benign | 0.2794 | benign | -0.803 | Destabilizing | 1.0 | D | 0.78 | deleterious | D | 0.794770238 | None | None | N |
D/P | 0.995 | likely_pathogenic | 0.9937 | pathogenic | 0.993 | Stabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
D/Q | 0.7935 | likely_pathogenic | 0.8018 | pathogenic | -0.496 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
D/R | 0.933 | likely_pathogenic | 0.9264 | pathogenic | 0.038 | Stabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
D/S | 0.4226 | ambiguous | 0.4519 | ambiguous | -1.099 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
D/T | 0.7718 | likely_pathogenic | 0.7912 | pathogenic | -0.687 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
D/V | 0.7652 | likely_pathogenic | 0.7911 | pathogenic | 0.993 | Stabilizing | 1.0 | D | 0.804 | deleterious | D | 0.7923515 | None | None | N |
D/W | 0.9841 | likely_pathogenic | 0.9853 | pathogenic | 0.958 | Stabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
D/Y | 0.6033 | likely_pathogenic | 0.6219 | pathogenic | 1.131 | Stabilizing | 1.0 | D | 0.828 | deleterious | D | 0.792447509 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.