Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26856 | 80791;80792;80793 | chr2:178565566;178565565;178565564 | chr2:179430293;179430292;179430291 |
N2AB | 25215 | 75868;75869;75870 | chr2:178565566;178565565;178565564 | chr2:179430293;179430292;179430291 |
N2A | 24288 | 73087;73088;73089 | chr2:178565566;178565565;178565564 | chr2:179430293;179430292;179430291 |
N2B | 17791 | 53596;53597;53598 | chr2:178565566;178565565;178565564 | chr2:179430293;179430292;179430291 |
Novex-1 | 17916 | 53971;53972;53973 | chr2:178565566;178565565;178565564 | chr2:179430293;179430292;179430291 |
Novex-2 | 17983 | 54172;54173;54174 | chr2:178565566;178565565;178565564 | chr2:179430293;179430292;179430291 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/N | rs773473233 | -1.419 | 0.81 | N | 0.617 | 0.398 | 0.465975295344 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.3284 | likely_benign | 0.3326 | benign | -2.415 | Highly Destabilizing | 0.617 | D | 0.5 | neutral | None | None | None | None | N |
Y/C | 0.0902 | likely_benign | 0.0825 | benign | -0.954 | Destabilizing | 0.99 | D | 0.605 | neutral | N | 0.46247359 | None | None | N |
Y/D | 0.4152 | ambiguous | 0.389 | ambiguous | -1.311 | Destabilizing | 0.379 | N | 0.599 | neutral | N | 0.481232709 | None | None | N |
Y/E | 0.4984 | ambiguous | 0.4911 | ambiguous | -1.164 | Destabilizing | 0.005 | N | 0.354 | neutral | None | None | None | None | N |
Y/F | 0.0628 | likely_benign | 0.0608 | benign | -0.757 | Destabilizing | 0.002 | N | 0.151 | neutral | N | 0.433670836 | None | None | N |
Y/G | 0.4536 | ambiguous | 0.4401 | ambiguous | -2.771 | Highly Destabilizing | 0.617 | D | 0.585 | neutral | None | None | None | None | N |
Y/H | 0.148 | likely_benign | 0.1421 | benign | -1.035 | Destabilizing | 0.896 | D | 0.541 | neutral | N | 0.43940473 | None | None | N |
Y/I | 0.2069 | likely_benign | 0.2041 | benign | -1.293 | Destabilizing | 0.447 | N | 0.531 | neutral | None | None | None | None | N |
Y/K | 0.405 | ambiguous | 0.4268 | ambiguous | -1.266 | Destabilizing | 0.447 | N | 0.601 | neutral | None | None | None | None | N |
Y/L | 0.3175 | likely_benign | 0.3253 | benign | -1.293 | Destabilizing | 0.25 | N | 0.433 | neutral | None | None | None | None | N |
Y/M | 0.3824 | ambiguous | 0.3992 | ambiguous | -0.938 | Destabilizing | 0.92 | D | 0.569 | neutral | None | None | None | None | N |
Y/N | 0.2215 | likely_benign | 0.1938 | benign | -1.729 | Destabilizing | 0.81 | D | 0.617 | neutral | N | 0.451603236 | None | None | N |
Y/P | 0.9787 | likely_pathogenic | 0.9745 | pathogenic | -1.669 | Destabilizing | 0.92 | D | 0.618 | neutral | None | None | None | None | N |
Y/Q | 0.3074 | likely_benign | 0.3014 | benign | -1.588 | Destabilizing | 0.739 | D | 0.599 | neutral | None | None | None | None | N |
Y/R | 0.2809 | likely_benign | 0.2918 | benign | -0.906 | Destabilizing | 0.85 | D | 0.628 | neutral | None | None | None | None | N |
Y/S | 0.1642 | likely_benign | 0.1524 | benign | -2.281 | Highly Destabilizing | 0.549 | D | 0.569 | neutral | N | 0.4324974 | None | None | N |
Y/T | 0.2504 | likely_benign | 0.243 | benign | -2.039 | Highly Destabilizing | 0.617 | D | 0.602 | neutral | None | None | None | None | N |
Y/V | 0.152 | likely_benign | 0.1525 | benign | -1.669 | Destabilizing | 0.447 | N | 0.481 | neutral | None | None | None | None | N |
Y/W | 0.2856 | likely_benign | 0.2952 | benign | -0.147 | Destabilizing | 0.972 | D | 0.523 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.