Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26863 | 80812;80813;80814 | chr2:178565545;178565544;178565543 | chr2:179430272;179430271;179430270 |
N2AB | 25222 | 75889;75890;75891 | chr2:178565545;178565544;178565543 | chr2:179430272;179430271;179430270 |
N2A | 24295 | 73108;73109;73110 | chr2:178565545;178565544;178565543 | chr2:179430272;179430271;179430270 |
N2B | 17798 | 53617;53618;53619 | chr2:178565545;178565544;178565543 | chr2:179430272;179430271;179430270 |
Novex-1 | 17923 | 53992;53993;53994 | chr2:178565545;178565544;178565543 | chr2:179430272;179430271;179430270 |
Novex-2 | 17990 | 54193;54194;54195 | chr2:178565545;178565544;178565543 | chr2:179430272;179430271;179430270 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs1424768327 | -0.249 | 0.4 | N | 0.355 | 0.071 | 0.146414634003 | gnomAD-2.1.1 | 6.37E-05 | None | None | None | None | I | None | 2.29516E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
D/E | rs1424768327 | -0.249 | 0.4 | N | 0.355 | 0.071 | 0.146414634003 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/E | rs1424768327 | -0.249 | 0.4 | N | 0.355 | 0.071 | 0.146414634003 | gnomAD-4.0.0 | 1.31515E-05 | None | None | None | None | I | None | 4.82625E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/G | rs1340374023 | -0.633 | 0.998 | N | 0.721 | 0.471 | 0.297718772494 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
D/G | rs1340374023 | -0.633 | 0.998 | N | 0.721 | 0.471 | 0.297718772494 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/G | rs1340374023 | -0.633 | 0.998 | N | 0.721 | 0.471 | 0.297718772494 | gnomAD-4.0.0 | 2.56293E-06 | None | None | None | None | I | None | 3.38352E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/N | rs776528193 | -0.154 | 1.0 | N | 0.733 | 0.324 | 0.335164054921 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 9.81E-05 | None | 0 | 1.77E-05 | 0 |
D/N | rs776528193 | -0.154 | 1.0 | N | 0.733 | 0.324 | 0.335164054921 | gnomAD-4.0.0 | 8.21162E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73732E-04 | 7.19657E-06 | 3.47907E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2448 | likely_benign | 0.2163 | benign | -0.293 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | N | 0.451043088 | None | None | I |
D/C | 0.7847 | likely_pathogenic | 0.7697 | pathogenic | 0.056 | Stabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
D/E | 0.1665 | likely_benign | 0.1593 | benign | -0.434 | Destabilizing | 0.4 | N | 0.355 | neutral | N | 0.335429426 | None | None | I |
D/F | 0.7011 | likely_pathogenic | 0.6397 | pathogenic | -0.308 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
D/G | 0.3971 | ambiguous | 0.3516 | ambiguous | -0.493 | Destabilizing | 0.998 | D | 0.721 | prob.delet. | N | 0.481133922 | None | None | I |
D/H | 0.4851 | ambiguous | 0.4469 | ambiguous | -0.222 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | N | 0.48477166 | None | None | I |
D/I | 0.4265 | ambiguous | 0.3568 | ambiguous | 0.183 | Stabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | I |
D/K | 0.5466 | ambiguous | 0.4955 | ambiguous | 0.221 | Stabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | I |
D/L | 0.4426 | ambiguous | 0.3831 | ambiguous | 0.183 | Stabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | I |
D/M | 0.6641 | likely_pathogenic | 0.6133 | pathogenic | 0.364 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
D/N | 0.1773 | likely_benign | 0.1547 | benign | -0.007 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | N | 0.494641937 | None | None | I |
D/P | 0.6677 | likely_pathogenic | 0.6193 | pathogenic | 0.047 | Stabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | I |
D/Q | 0.4665 | ambiguous | 0.4334 | ambiguous | 0.008 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
D/R | 0.6379 | likely_pathogenic | 0.583 | pathogenic | 0.368 | Stabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
D/S | 0.195 | likely_benign | 0.1763 | benign | -0.124 | Destabilizing | 0.998 | D | 0.711 | prob.delet. | None | None | None | None | I |
D/T | 0.3883 | ambiguous | 0.3416 | ambiguous | 0.025 | Stabilizing | 0.999 | D | 0.748 | deleterious | None | None | None | None | I |
D/V | 0.2678 | likely_benign | 0.2272 | benign | 0.047 | Stabilizing | 0.999 | D | 0.739 | prob.delet. | N | 0.472111794 | None | None | I |
D/W | 0.9453 | likely_pathogenic | 0.9306 | pathogenic | -0.201 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
D/Y | 0.3587 | ambiguous | 0.3027 | benign | -0.077 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | N | 0.468330591 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.