Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26864 | 80815;80816;80817 | chr2:178565542;178565541;178565540 | chr2:179430269;179430268;179430267 |
N2AB | 25223 | 75892;75893;75894 | chr2:178565542;178565541;178565540 | chr2:179430269;179430268;179430267 |
N2A | 24296 | 73111;73112;73113 | chr2:178565542;178565541;178565540 | chr2:179430269;179430268;179430267 |
N2B | 17799 | 53620;53621;53622 | chr2:178565542;178565541;178565540 | chr2:179430269;179430268;179430267 |
Novex-1 | 17924 | 53995;53996;53997 | chr2:178565542;178565541;178565540 | chr2:179430269;179430268;179430267 |
Novex-2 | 17991 | 54196;54197;54198 | chr2:178565542;178565541;178565540 | chr2:179430269;179430268;179430267 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs1296708710 | -1.74 | 1.0 | N | 0.741 | 0.424 | 0.339316883193 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/A | rs1296708710 | -1.74 | 1.0 | N | 0.741 | 0.424 | 0.339316883193 | gnomAD-4.0.0 | 1.5917E-06 | None | None | None | None | N | None | 0 | 2.28666E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1343 | likely_benign | 0.1072 | benign | -1.589 | Destabilizing | 1.0 | D | 0.741 | deleterious | N | 0.470479731 | None | None | N |
P/C | 0.6879 | likely_pathogenic | 0.6224 | pathogenic | -0.888 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
P/D | 0.8448 | likely_pathogenic | 0.7701 | pathogenic | -1.542 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
P/E | 0.743 | likely_pathogenic | 0.6365 | pathogenic | -1.571 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
P/F | 0.6684 | likely_pathogenic | 0.528 | ambiguous | -1.29 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
P/G | 0.5237 | ambiguous | 0.4342 | ambiguous | -1.872 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
P/H | 0.5414 | ambiguous | 0.4296 | ambiguous | -1.353 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
P/I | 0.6805 | likely_pathogenic | 0.5641 | pathogenic | -0.915 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
P/K | 0.8994 | likely_pathogenic | 0.8484 | pathogenic | -1.352 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
P/L | 0.4733 | ambiguous | 0.3499 | ambiguous | -0.915 | Destabilizing | 1.0 | D | 0.835 | deleterious | N | 0.508320855 | None | None | N |
P/M | 0.6803 | likely_pathogenic | 0.563 | ambiguous | -0.599 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
P/N | 0.8 | likely_pathogenic | 0.6991 | pathogenic | -1.063 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
P/Q | 0.6364 | likely_pathogenic | 0.5136 | ambiguous | -1.304 | Destabilizing | 1.0 | D | 0.813 | deleterious | D | 0.539973916 | None | None | N |
P/R | 0.8102 | likely_pathogenic | 0.7149 | pathogenic | -0.705 | Destabilizing | 1.0 | D | 0.864 | deleterious | N | 0.507373031 | None | None | N |
P/S | 0.253 | likely_benign | 0.1936 | benign | -1.517 | Destabilizing | 1.0 | D | 0.775 | deleterious | N | 0.492218063 | None | None | N |
P/T | 0.3511 | ambiguous | 0.2622 | benign | -1.453 | Destabilizing | 1.0 | D | 0.77 | deleterious | N | 0.516843232 | None | None | N |
P/V | 0.5482 | ambiguous | 0.436 | ambiguous | -1.107 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
P/W | 0.8019 | likely_pathogenic | 0.7319 | pathogenic | -1.437 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
P/Y | 0.7207 | likely_pathogenic | 0.6055 | pathogenic | -1.198 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.