Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26874 | 80845;80846;80847 | chr2:178565512;178565511;178565510 | chr2:179430239;179430238;179430237 |
N2AB | 25233 | 75922;75923;75924 | chr2:178565512;178565511;178565510 | chr2:179430239;179430238;179430237 |
N2A | 24306 | 73141;73142;73143 | chr2:178565512;178565511;178565510 | chr2:179430239;179430238;179430237 |
N2B | 17809 | 53650;53651;53652 | chr2:178565512;178565511;178565510 | chr2:179430239;179430238;179430237 |
Novex-1 | 17934 | 54025;54026;54027 | chr2:178565512;178565511;178565510 | chr2:179430239;179430238;179430237 |
Novex-2 | 18001 | 54226;54227;54228 | chr2:178565512;178565511;178565510 | chr2:179430239;179430238;179430237 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs372155974 | 0.337 | 0.059 | D | 0.506 | 0.231 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
K/E | rs372155974 | 0.337 | 0.059 | D | 0.506 | 0.231 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/E | rs372155974 | 0.337 | 0.059 | D | 0.506 | 0.231 | None | gnomAD-4.0.0 | 6.57531E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47089E-05 | 0 | 0 |
K/T | None | None | 0.059 | N | 0.661 | 0.259 | 0.319970858106 | gnomAD-4.0.0 | 2.7373E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59835E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5954 | likely_pathogenic | 0.5443 | ambiguous | -0.386 | Destabilizing | 0.218 | N | 0.611 | neutral | None | None | None | None | N |
K/C | 0.8281 | likely_pathogenic | 0.8103 | pathogenic | -0.481 | Destabilizing | 0.978 | D | 0.859 | deleterious | None | None | None | None | N |
K/D | 0.8622 | likely_pathogenic | 0.8375 | pathogenic | 0.074 | Stabilizing | 0.218 | N | 0.677 | prob.neutral | None | None | None | None | N |
K/E | 0.3554 | ambiguous | 0.3299 | benign | 0.131 | Stabilizing | 0.059 | N | 0.506 | neutral | D | 0.523375694 | None | None | N |
K/F | 0.9419 | likely_pathogenic | 0.9396 | pathogenic | -0.343 | Destabilizing | 0.612 | D | 0.792 | deleterious | None | None | None | None | N |
K/G | 0.7107 | likely_pathogenic | 0.6655 | pathogenic | -0.682 | Destabilizing | 0.218 | N | 0.607 | neutral | None | None | None | None | N |
K/H | 0.4715 | ambiguous | 0.4647 | ambiguous | -1.048 | Destabilizing | 0.448 | N | 0.574 | neutral | None | None | None | None | N |
K/I | 0.7019 | likely_pathogenic | 0.6748 | pathogenic | 0.342 | Stabilizing | 0.104 | N | 0.808 | deleterious | None | None | None | None | N |
K/L | 0.6926 | likely_pathogenic | 0.6628 | pathogenic | 0.342 | Stabilizing | 0.016 | N | 0.637 | neutral | None | None | None | None | N |
K/M | 0.4731 | ambiguous | 0.4484 | ambiguous | 0.257 | Stabilizing | 0.804 | D | 0.581 | neutral | N | 0.49797046 | None | None | N |
K/N | 0.6932 | likely_pathogenic | 0.6187 | pathogenic | -0.174 | Destabilizing | 0.001 | N | 0.317 | neutral | N | 0.491587678 | None | None | N |
K/P | 0.9774 | likely_pathogenic | 0.9762 | pathogenic | 0.13 | Stabilizing | 0.798 | D | 0.627 | neutral | None | None | None | None | N |
K/Q | 0.1928 | likely_benign | 0.1897 | benign | -0.342 | Destabilizing | 0.151 | N | 0.535 | neutral | N | 0.483016076 | None | None | N |
K/R | 0.0886 | likely_benign | 0.0848 | benign | -0.395 | Destabilizing | 0.001 | N | 0.286 | neutral | N | 0.485318738 | None | None | N |
K/S | 0.6448 | likely_pathogenic | 0.5833 | pathogenic | -0.822 | Destabilizing | 0.007 | N | 0.325 | neutral | None | None | None | None | N |
K/T | 0.3489 | ambiguous | 0.3125 | benign | -0.58 | Destabilizing | 0.059 | N | 0.661 | prob.neutral | N | 0.502690494 | None | None | N |
K/V | 0.5771 | likely_pathogenic | 0.5429 | ambiguous | 0.13 | Stabilizing | 0.07 | N | 0.655 | prob.neutral | None | None | None | None | N |
K/W | 0.9126 | likely_pathogenic | 0.9124 | pathogenic | -0.224 | Destabilizing | 0.985 | D | 0.87 | deleterious | None | None | None | None | N |
K/Y | 0.858 | likely_pathogenic | 0.8493 | pathogenic | 0.088 | Stabilizing | 0.156 | N | 0.808 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.