Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26883 | 80872;80873;80874 | chr2:178565485;178565484;178565483 | chr2:179430212;179430211;179430210 |
N2AB | 25242 | 75949;75950;75951 | chr2:178565485;178565484;178565483 | chr2:179430212;179430211;179430210 |
N2A | 24315 | 73168;73169;73170 | chr2:178565485;178565484;178565483 | chr2:179430212;179430211;179430210 |
N2B | 17818 | 53677;53678;53679 | chr2:178565485;178565484;178565483 | chr2:179430212;179430211;179430210 |
Novex-1 | 17943 | 54052;54053;54054 | chr2:178565485;178565484;178565483 | chr2:179430212;179430211;179430210 |
Novex-2 | 18010 | 54253;54254;54255 | chr2:178565485;178565484;178565483 | chr2:179430212;179430211;179430210 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.901 | N | 0.486 | 0.145 | 0.12205267543 | gnomAD-4.0.0 | 1.59254E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8604E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4255 | ambiguous | 0.4473 | ambiguous | -0.084 | Destabilizing | 0.633 | D | 0.499 | neutral | None | None | None | None | I |
K/C | 0.6606 | likely_pathogenic | 0.6816 | pathogenic | -0.357 | Destabilizing | 0.996 | D | 0.641 | neutral | None | None | None | None | I |
K/D | 0.6073 | likely_pathogenic | 0.6353 | pathogenic | 0.107 | Stabilizing | 0.923 | D | 0.477 | neutral | None | None | None | None | I |
K/E | 0.2635 | likely_benign | 0.2801 | benign | 0.176 | Stabilizing | 0.565 | D | 0.541 | neutral | N | 0.434139691 | None | None | I |
K/F | 0.7376 | likely_pathogenic | 0.7421 | pathogenic | -0.014 | Destabilizing | 0.923 | D | 0.629 | neutral | None | None | None | None | I |
K/G | 0.5851 | likely_pathogenic | 0.601 | pathogenic | -0.363 | Destabilizing | 0.923 | D | 0.485 | neutral | None | None | None | None | I |
K/H | 0.2455 | likely_benign | 0.2422 | benign | -0.566 | Destabilizing | 0.989 | D | 0.531 | neutral | None | None | None | None | I |
K/I | 0.3404 | ambiguous | 0.3647 | ambiguous | 0.596 | Stabilizing | 0.858 | D | 0.624 | neutral | None | None | None | None | I |
K/L | 0.3615 | ambiguous | 0.375 | ambiguous | 0.596 | Stabilizing | 0.372 | N | 0.485 | neutral | None | None | None | None | I |
K/M | 0.2755 | likely_benign | 0.2934 | benign | 0.152 | Stabilizing | 0.156 | N | 0.399 | neutral | N | 0.49024369 | None | None | I |
K/N | 0.4398 | ambiguous | 0.4542 | ambiguous | -0.042 | Destabilizing | 0.901 | D | 0.486 | neutral | N | 0.460614216 | None | None | I |
K/P | 0.742 | likely_pathogenic | 0.7462 | pathogenic | 0.399 | Stabilizing | 0.961 | D | 0.525 | neutral | None | None | None | None | I |
K/Q | 0.1353 | likely_benign | 0.1327 | benign | -0.08 | Destabilizing | 0.075 | N | 0.271 | neutral | N | 0.45486168 | None | None | I |
K/R | 0.0859 | likely_benign | 0.0801 | benign | -0.216 | Destabilizing | 0.565 | D | 0.509 | neutral | N | 0.415727288 | None | None | I |
K/S | 0.4436 | ambiguous | 0.4568 | ambiguous | -0.544 | Destabilizing | 0.775 | D | 0.505 | neutral | None | None | None | None | I |
K/T | 0.1999 | likely_benign | 0.2163 | benign | -0.294 | Destabilizing | 0.901 | D | 0.474 | neutral | N | 0.449567716 | None | None | I |
K/V | 0.3235 | likely_benign | 0.3374 | benign | 0.399 | Stabilizing | 0.633 | D | 0.479 | neutral | None | None | None | None | I |
K/W | 0.7331 | likely_pathogenic | 0.7434 | pathogenic | -0.027 | Destabilizing | 0.996 | D | 0.656 | neutral | None | None | None | None | I |
K/Y | 0.5673 | likely_pathogenic | 0.5865 | pathogenic | 0.302 | Stabilizing | 0.961 | D | 0.582 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.