Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26888 | 80887;80888;80889 | chr2:178565470;178565469;178565468 | chr2:179430197;179430196;179430195 |
N2AB | 25247 | 75964;75965;75966 | chr2:178565470;178565469;178565468 | chr2:179430197;179430196;179430195 |
N2A | 24320 | 73183;73184;73185 | chr2:178565470;178565469;178565468 | chr2:179430197;179430196;179430195 |
N2B | 17823 | 53692;53693;53694 | chr2:178565470;178565469;178565468 | chr2:179430197;179430196;179430195 |
Novex-1 | 17948 | 54067;54068;54069 | chr2:178565470;178565469;178565468 | chr2:179430197;179430196;179430195 |
Novex-2 | 18015 | 54268;54269;54270 | chr2:178565470;178565469;178565468 | chr2:179430197;179430196;179430195 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.997 | N | 0.705 | 0.389 | 0.312306559268 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1158 | likely_benign | 0.1278 | benign | -0.839 | Destabilizing | 0.898 | D | 0.431 | neutral | N | 0.513043192 | None | None | N |
T/C | 0.4734 | ambiguous | 0.5248 | ambiguous | -0.477 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
T/D | 0.6221 | likely_pathogenic | 0.6583 | pathogenic | 0.446 | Stabilizing | 0.995 | D | 0.657 | neutral | None | None | None | None | N |
T/E | 0.5704 | likely_pathogenic | 0.6065 | pathogenic | 0.477 | Stabilizing | 0.995 | D | 0.651 | neutral | None | None | None | None | N |
T/F | 0.441 | ambiguous | 0.4675 | ambiguous | -0.973 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
T/G | 0.3752 | ambiguous | 0.4009 | ambiguous | -1.096 | Destabilizing | 0.966 | D | 0.599 | neutral | None | None | None | None | N |
T/H | 0.3561 | ambiguous | 0.3737 | ambiguous | -1.175 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
T/I | 0.2274 | likely_benign | 0.2687 | benign | -0.241 | Destabilizing | 0.997 | D | 0.705 | prob.neutral | N | 0.457413634 | None | None | N |
T/K | 0.4375 | ambiguous | 0.4885 | ambiguous | -0.315 | Destabilizing | 0.993 | D | 0.657 | neutral | N | 0.512427116 | None | None | N |
T/L | 0.1669 | likely_benign | 0.186 | benign | -0.241 | Destabilizing | 0.983 | D | 0.578 | neutral | None | None | None | None | N |
T/M | 0.1344 | likely_benign | 0.1316 | benign | -0.196 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
T/N | 0.1488 | likely_benign | 0.1517 | benign | -0.379 | Destabilizing | 0.995 | D | 0.628 | neutral | None | None | None | None | N |
T/P | 0.4843 | ambiguous | 0.527 | ambiguous | -0.408 | Destabilizing | 0.997 | D | 0.696 | prob.neutral | N | 0.511733683 | None | None | N |
T/Q | 0.3653 | ambiguous | 0.3784 | ambiguous | -0.416 | Destabilizing | 0.998 | D | 0.703 | prob.neutral | None | None | None | None | N |
T/R | 0.3523 | ambiguous | 0.4034 | ambiguous | -0.187 | Destabilizing | 0.993 | D | 0.694 | prob.neutral | N | 0.450981626 | None | None | N |
T/S | 0.1262 | likely_benign | 0.1246 | benign | -0.765 | Destabilizing | 0.362 | N | 0.333 | neutral | N | 0.482506854 | None | None | N |
T/V | 0.1701 | likely_benign | 0.195 | benign | -0.408 | Destabilizing | 0.983 | D | 0.507 | neutral | None | None | None | None | N |
T/W | 0.8003 | likely_pathogenic | 0.8212 | pathogenic | -0.916 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
T/Y | 0.3833 | ambiguous | 0.4304 | ambiguous | -0.639 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.