Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26893 | 80902;80903;80904 | chr2:178565455;178565454;178565453 | chr2:179430182;179430181;179430180 |
N2AB | 25252 | 75979;75980;75981 | chr2:178565455;178565454;178565453 | chr2:179430182;179430181;179430180 |
N2A | 24325 | 73198;73199;73200 | chr2:178565455;178565454;178565453 | chr2:179430182;179430181;179430180 |
N2B | 17828 | 53707;53708;53709 | chr2:178565455;178565454;178565453 | chr2:179430182;179430181;179430180 |
Novex-1 | 17953 | 54082;54083;54084 | chr2:178565455;178565454;178565453 | chr2:179430182;179430181;179430180 |
Novex-2 | 18020 | 54283;54284;54285 | chr2:178565455;178565454;178565453 | chr2:179430182;179430181;179430180 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | rs1273776382 | None | 0.826 | N | 0.44 | 0.283 | 0.246215685461 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.77555E-04 |
A/G | rs1273776382 | None | 0.826 | N | 0.44 | 0.283 | 0.246215685461 | gnomAD-4.0.0 | 2.56383E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.39404E-06 | 0 | 2.84706E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4802 | ambiguous | 0.5116 | ambiguous | -0.791 | Destabilizing | 0.999 | D | 0.439 | neutral | None | None | None | None | N |
A/D | 0.4694 | ambiguous | 0.4974 | ambiguous | -0.825 | Destabilizing | 0.852 | D | 0.421 | neutral | N | 0.460429055 | None | None | N |
A/E | 0.3351 | likely_benign | 0.3677 | ambiguous | -0.969 | Destabilizing | 0.884 | D | 0.409 | neutral | None | None | None | None | N |
A/F | 0.4234 | ambiguous | 0.4267 | ambiguous | -1.06 | Destabilizing | 0.997 | D | 0.429 | neutral | None | None | None | None | N |
A/G | 0.152 | likely_benign | 0.1637 | benign | -0.663 | Destabilizing | 0.826 | D | 0.44 | neutral | N | 0.492611867 | None | None | N |
A/H | 0.5377 | ambiguous | 0.568 | pathogenic | -0.697 | Destabilizing | 0.991 | D | 0.423 | neutral | None | None | None | None | N |
A/I | 0.26 | likely_benign | 0.2693 | benign | -0.498 | Destabilizing | 0.991 | D | 0.419 | neutral | None | None | None | None | N |
A/K | 0.4682 | ambiguous | 0.5156 | ambiguous | -0.916 | Destabilizing | 0.884 | D | 0.418 | neutral | None | None | None | None | N |
A/L | 0.2521 | likely_benign | 0.2638 | benign | -0.498 | Destabilizing | 0.969 | D | 0.407 | neutral | None | None | None | None | N |
A/M | 0.2536 | likely_benign | 0.2602 | benign | -0.395 | Destabilizing | 0.999 | D | 0.413 | neutral | None | None | None | None | N |
A/N | 0.3035 | likely_benign | 0.323 | benign | -0.54 | Destabilizing | 0.079 | N | 0.259 | neutral | None | None | None | None | N |
A/P | 0.4286 | ambiguous | 0.4571 | ambiguous | -0.484 | Destabilizing | 0.988 | D | 0.409 | neutral | N | 0.504925141 | None | None | N |
A/Q | 0.3774 | ambiguous | 0.4127 | ambiguous | -0.859 | Destabilizing | 0.579 | D | 0.3 | neutral | None | None | None | None | N |
A/R | 0.4545 | ambiguous | 0.4995 | ambiguous | -0.384 | Destabilizing | 0.939 | D | 0.418 | neutral | None | None | None | None | N |
A/S | 0.0998 | likely_benign | 0.103 | benign | -0.753 | Destabilizing | 0.31 | N | 0.262 | neutral | N | 0.472236719 | None | None | N |
A/T | 0.1103 | likely_benign | 0.1131 | benign | -0.824 | Destabilizing | 0.852 | D | 0.435 | neutral | N | 0.454312989 | None | None | N |
A/V | 0.1233 | likely_benign | 0.1271 | benign | -0.484 | Destabilizing | 0.959 | D | 0.47 | neutral | N | 0.442777817 | None | None | N |
A/W | 0.8118 | likely_pathogenic | 0.8239 | pathogenic | -1.203 | Destabilizing | 0.999 | D | 0.524 | neutral | None | None | None | None | N |
A/Y | 0.548 | ambiguous | 0.5709 | pathogenic | -0.872 | Destabilizing | 0.997 | D | 0.429 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.