Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26894 | 80905;80906;80907 | chr2:178565452;178565451;178565450 | chr2:179430179;179430178;179430177 |
N2AB | 25253 | 75982;75983;75984 | chr2:178565452;178565451;178565450 | chr2:179430179;179430178;179430177 |
N2A | 24326 | 73201;73202;73203 | chr2:178565452;178565451;178565450 | chr2:179430179;179430178;179430177 |
N2B | 17829 | 53710;53711;53712 | chr2:178565452;178565451;178565450 | chr2:179430179;179430178;179430177 |
Novex-1 | 17954 | 54085;54086;54087 | chr2:178565452;178565451;178565450 | chr2:179430179;179430178;179430177 |
Novex-2 | 18021 | 54286;54287;54288 | chr2:178565452;178565451;178565450 | chr2:179430179;179430178;179430177 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | rs928657933 | None | 0.928 | D | 0.621 | 0.836 | 0.634485840324 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/A | rs928657933 | None | 0.928 | D | 0.621 | 0.836 | 0.634485840324 | gnomAD-4.0.0 | 1.85971E-06 | None | None | None | None | I | None | 2.67194E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.6021E-05 |
G/E | None | None | 0.978 | D | 0.79 | 0.774 | 0.77413480687 | gnomAD-4.0.0 | 6.84418E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.87378E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3441 | ambiguous | 0.3268 | benign | -0.467 | Destabilizing | 0.928 | D | 0.621 | neutral | D | 0.624522461 | None | None | I |
G/C | 0.4398 | ambiguous | 0.441 | ambiguous | -0.871 | Destabilizing | 0.999 | D | 0.796 | deleterious | None | None | None | None | I |
G/D | 0.4241 | ambiguous | 0.4209 | ambiguous | -1.032 | Destabilizing | 0.992 | D | 0.805 | deleterious | None | None | None | None | I |
G/E | 0.4323 | ambiguous | 0.4277 | ambiguous | -1.203 | Destabilizing | 0.978 | D | 0.79 | deleterious | D | 0.605233153 | None | None | I |
G/F | 0.8383 | likely_pathogenic | 0.8335 | pathogenic | -1.215 | Destabilizing | 0.983 | D | 0.809 | deleterious | None | None | None | None | I |
G/H | 0.5078 | ambiguous | 0.5073 | ambiguous | -0.727 | Destabilizing | 0.998 | D | 0.81 | deleterious | None | None | None | None | I |
G/I | 0.8065 | likely_pathogenic | 0.7978 | pathogenic | -0.587 | Destabilizing | 0.968 | D | 0.789 | deleterious | None | None | None | None | I |
G/K | 0.4524 | ambiguous | 0.4421 | ambiguous | -1.016 | Destabilizing | 0.968 | D | 0.774 | deleterious | None | None | None | None | I |
G/L | 0.7328 | likely_pathogenic | 0.7231 | pathogenic | -0.587 | Destabilizing | 0.11 | N | 0.597 | neutral | None | None | None | None | I |
G/M | 0.735 | likely_pathogenic | 0.7245 | pathogenic | -0.437 | Destabilizing | 0.996 | D | 0.821 | deleterious | None | None | None | None | I |
G/N | 0.3659 | ambiguous | 0.375 | ambiguous | -0.621 | Destabilizing | 0.983 | D | 0.796 | deleterious | None | None | None | None | I |
G/P | 0.9657 | likely_pathogenic | 0.9674 | pathogenic | -0.514 | Destabilizing | 0.997 | D | 0.814 | deleterious | None | None | None | None | I |
G/Q | 0.4117 | ambiguous | 0.4103 | ambiguous | -0.979 | Destabilizing | 0.983 | D | 0.815 | deleterious | None | None | None | None | I |
G/R | 0.3486 | ambiguous | 0.3344 | benign | -0.468 | Destabilizing | 0.175 | N | 0.581 | neutral | D | 0.640975791 | None | None | I |
G/S | 0.1835 | likely_benign | 0.1792 | benign | -0.719 | Destabilizing | 0.983 | D | 0.783 | deleterious | None | None | None | None | I |
G/T | 0.4146 | ambiguous | 0.3994 | ambiguous | -0.836 | Destabilizing | 0.983 | D | 0.79 | deleterious | None | None | None | None | I |
G/V | 0.6839 | likely_pathogenic | 0.6601 | pathogenic | -0.514 | Destabilizing | 0.957 | D | 0.785 | deleterious | D | 0.666715707 | None | None | I |
G/W | 0.6576 | likely_pathogenic | 0.6639 | pathogenic | -1.35 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | I |
G/Y | 0.7258 | likely_pathogenic | 0.7211 | pathogenic | -1.023 | Destabilizing | 0.999 | D | 0.824 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.