Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26895 | 80908;80909;80910 | chr2:178565449;178565448;178565447 | chr2:179430176;179430175;179430174 |
N2AB | 25254 | 75985;75986;75987 | chr2:178565449;178565448;178565447 | chr2:179430176;179430175;179430174 |
N2A | 24327 | 73204;73205;73206 | chr2:178565449;178565448;178565447 | chr2:179430176;179430175;179430174 |
N2B | 17830 | 53713;53714;53715 | chr2:178565449;178565448;178565447 | chr2:179430176;179430175;179430174 |
Novex-1 | 17955 | 54088;54089;54090 | chr2:178565449;178565448;178565447 | chr2:179430176;179430175;179430174 |
Novex-2 | 18022 | 54289;54290;54291 | chr2:178565449;178565448;178565447 | chr2:179430176;179430175;179430174 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.981 | N | 0.421 | 0.249 | 0.296679040009 | gnomAD-4.0.0 | 2.05321E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69876E-06 | 0 | 0 |
E/K | None | None | 0.996 | N | 0.458 | 0.294 | 0.28492961333 | gnomAD-4.0.0 | 3.422E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49797E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1686 | likely_benign | 0.2028 | benign | -0.571 | Destabilizing | 0.998 | D | 0.536 | neutral | N | 0.515528923 | None | None | N |
E/C | 0.7725 | likely_pathogenic | 0.8385 | pathogenic | -0.017 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
E/D | 0.0967 | likely_benign | 0.1115 | benign | -0.486 | Destabilizing | 0.981 | D | 0.421 | neutral | N | 0.446300911 | None | None | N |
E/F | 0.7347 | likely_pathogenic | 0.8091 | pathogenic | -0.519 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
E/G | 0.1521 | likely_benign | 0.1856 | benign | -0.785 | Destabilizing | 0.996 | D | 0.571 | neutral | N | 0.495903013 | None | None | N |
E/H | 0.3809 | ambiguous | 0.4737 | ambiguous | -0.482 | Destabilizing | 1.0 | D | 0.636 | neutral | None | None | None | None | N |
E/I | 0.4226 | ambiguous | 0.5201 | ambiguous | -0.033 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/K | 0.1161 | likely_benign | 0.159 | benign | 0.166 | Stabilizing | 0.996 | D | 0.458 | neutral | N | 0.488803682 | None | None | N |
E/L | 0.4369 | ambiguous | 0.5286 | ambiguous | -0.033 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
E/M | 0.4222 | ambiguous | 0.4909 | ambiguous | 0.246 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/N | 0.1767 | likely_benign | 0.2213 | benign | -0.111 | Destabilizing | 0.91 | D | 0.325 | neutral | None | None | None | None | N |
E/P | 0.8998 | likely_pathogenic | 0.9262 | pathogenic | -0.192 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | N |
E/Q | 0.1257 | likely_benign | 0.1481 | benign | -0.089 | Destabilizing | 0.999 | D | 0.607 | neutral | N | 0.453266956 | None | None | N |
E/R | 0.2219 | likely_benign | 0.2954 | benign | 0.305 | Stabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
E/S | 0.1572 | likely_benign | 0.1884 | benign | -0.291 | Destabilizing | 0.997 | D | 0.477 | neutral | None | None | None | None | N |
E/T | 0.2007 | likely_benign | 0.2458 | benign | -0.12 | Destabilizing | 0.999 | D | 0.623 | neutral | None | None | None | None | N |
E/V | 0.2594 | likely_benign | 0.318 | benign | -0.192 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | N | 0.479613401 | None | None | N |
E/W | 0.8874 | likely_pathogenic | 0.9285 | pathogenic | -0.366 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
E/Y | 0.5739 | likely_pathogenic | 0.6808 | pathogenic | -0.279 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.