Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26899 | 80920;80921;80922 | chr2:178565437;178565436;178565435 | chr2:179430164;179430163;179430162 |
N2AB | 25258 | 75997;75998;75999 | chr2:178565437;178565436;178565435 | chr2:179430164;179430163;179430162 |
N2A | 24331 | 73216;73217;73218 | chr2:178565437;178565436;178565435 | chr2:179430164;179430163;179430162 |
N2B | 17834 | 53725;53726;53727 | chr2:178565437;178565436;178565435 | chr2:179430164;179430163;179430162 |
Novex-1 | 17959 | 54100;54101;54102 | chr2:178565437;178565436;178565435 | chr2:179430164;179430163;179430162 |
Novex-2 | 18026 | 54301;54302;54303 | chr2:178565437;178565436;178565435 | chr2:179430164;179430163;179430162 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/R | None | None | 0.971 | D | 0.832 | 0.717 | 0.831722884016 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6217 | likely_pathogenic | 0.569 | pathogenic | -2.279 | Highly Destabilizing | 0.754 | D | 0.682 | prob.neutral | None | None | None | None | N |
I/C | 0.8718 | likely_pathogenic | 0.8789 | pathogenic | -1.592 | Destabilizing | 0.994 | D | 0.711 | prob.delet. | None | None | None | None | N |
I/D | 0.9947 | likely_pathogenic | 0.9942 | pathogenic | -2.711 | Highly Destabilizing | 0.993 | D | 0.827 | deleterious | None | None | None | None | N |
I/E | 0.9832 | likely_pathogenic | 0.9822 | pathogenic | -2.47 | Highly Destabilizing | 0.978 | D | 0.831 | deleterious | None | None | None | None | N |
I/F | 0.3569 | ambiguous | 0.3533 | ambiguous | -1.525 | Destabilizing | 0.956 | D | 0.691 | prob.neutral | None | None | None | None | N |
I/G | 0.9507 | likely_pathogenic | 0.9436 | pathogenic | -2.742 | Highly Destabilizing | 0.978 | D | 0.821 | deleterious | None | None | None | None | N |
I/H | 0.9809 | likely_pathogenic | 0.9824 | pathogenic | -2.086 | Highly Destabilizing | 0.998 | D | 0.809 | deleterious | None | None | None | None | N |
I/K | 0.9653 | likely_pathogenic | 0.9686 | pathogenic | -1.836 | Destabilizing | 0.971 | D | 0.829 | deleterious | D | 0.522043105 | None | None | N |
I/L | 0.1445 | likely_benign | 0.1534 | benign | -0.918 | Destabilizing | 0.294 | N | 0.421 | neutral | N | 0.408255103 | None | None | N |
I/M | 0.148 | likely_benign | 0.1364 | benign | -0.915 | Destabilizing | 0.942 | D | 0.661 | neutral | D | 0.531480676 | None | None | N |
I/N | 0.9536 | likely_pathogenic | 0.9539 | pathogenic | -2.349 | Highly Destabilizing | 0.993 | D | 0.827 | deleterious | None | None | None | None | N |
I/P | 0.9844 | likely_pathogenic | 0.9804 | pathogenic | -1.359 | Destabilizing | 0.993 | D | 0.827 | deleterious | None | None | None | None | N |
I/Q | 0.9691 | likely_pathogenic | 0.971 | pathogenic | -2.144 | Highly Destabilizing | 0.993 | D | 0.831 | deleterious | None | None | None | None | N |
I/R | 0.9453 | likely_pathogenic | 0.95 | pathogenic | -1.739 | Destabilizing | 0.971 | D | 0.832 | deleterious | D | 0.54014736 | None | None | N |
I/S | 0.9022 | likely_pathogenic | 0.8831 | pathogenic | -2.907 | Highly Destabilizing | 0.956 | D | 0.796 | deleterious | None | None | None | None | N |
I/T | 0.6772 | likely_pathogenic | 0.6128 | pathogenic | -2.519 | Highly Destabilizing | 0.822 | D | 0.724 | prob.delet. | D | 0.539893871 | None | None | N |
I/V | 0.0883 | likely_benign | 0.085 | benign | -1.359 | Destabilizing | 0.006 | N | 0.22 | neutral | N | 0.498349538 | None | None | N |
I/W | 0.9449 | likely_pathogenic | 0.9422 | pathogenic | -1.758 | Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | N |
I/Y | 0.8615 | likely_pathogenic | 0.8784 | pathogenic | -1.498 | Destabilizing | 0.978 | D | 0.714 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.