Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26903 | 80932;80933;80934 | chr2:178565425;178565424;178565423 | chr2:179430152;179430151;179430150 |
N2AB | 25262 | 76009;76010;76011 | chr2:178565425;178565424;178565423 | chr2:179430152;179430151;179430150 |
N2A | 24335 | 73228;73229;73230 | chr2:178565425;178565424;178565423 | chr2:179430152;179430151;179430150 |
N2B | 17838 | 53737;53738;53739 | chr2:178565425;178565424;178565423 | chr2:179430152;179430151;179430150 |
Novex-1 | 17963 | 54112;54113;54114 | chr2:178565425;178565424;178565423 | chr2:179430152;179430151;179430150 |
Novex-2 | 18030 | 54313;54314;54315 | chr2:178565425;178565424;178565423 | chr2:179430152;179430151;179430150 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1559341049 | None | None | N | 0.289 | 0.151 | 0.409533910539 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.66058E-04 |
V/I | rs1559341049 | None | None | N | 0.289 | 0.151 | 0.409533910539 | gnomAD-4.0.0 | 4.79048E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49788E-06 | 1.15982E-05 | 1.65733E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4292 | ambiguous | 0.3845 | ambiguous | -1.772 | Destabilizing | 0.052 | N | 0.625 | neutral | N | 0.488431693 | None | None | I |
V/C | 0.7015 | likely_pathogenic | 0.6545 | pathogenic | -1.604 | Destabilizing | 0.935 | D | 0.755 | deleterious | None | None | None | None | I |
V/D | 0.9292 | likely_pathogenic | 0.9257 | pathogenic | -1.859 | Destabilizing | 0.484 | N | 0.826 | deleterious | D | 0.60712442 | None | None | I |
V/E | 0.8577 | likely_pathogenic | 0.8558 | pathogenic | -1.775 | Destabilizing | 0.555 | D | 0.801 | deleterious | None | None | None | None | I |
V/F | 0.1193 | likely_benign | 0.1106 | benign | -1.268 | Destabilizing | None | N | 0.461 | neutral | N | 0.489633514 | None | None | I |
V/G | 0.5755 | likely_pathogenic | 0.5437 | ambiguous | -2.181 | Highly Destabilizing | 0.484 | N | 0.815 | deleterious | D | 0.581586308 | None | None | I |
V/H | 0.8352 | likely_pathogenic | 0.8232 | pathogenic | -1.814 | Destabilizing | 0.935 | D | 0.801 | deleterious | None | None | None | None | I |
V/I | 0.076 | likely_benign | 0.0733 | benign | -0.702 | Destabilizing | None | N | 0.289 | neutral | N | 0.475230323 | None | None | I |
V/K | 0.8422 | likely_pathogenic | 0.8444 | pathogenic | -1.417 | Destabilizing | 0.555 | D | 0.8 | deleterious | None | None | None | None | I |
V/L | 0.2184 | likely_benign | 0.2059 | benign | -0.702 | Destabilizing | 0.004 | N | 0.485 | neutral | D | 0.56973676 | None | None | I |
V/M | 0.191 | likely_benign | 0.1667 | benign | -0.77 | Destabilizing | 0.38 | N | 0.669 | neutral | None | None | None | None | I |
V/N | 0.7911 | likely_pathogenic | 0.7658 | pathogenic | -1.409 | Destabilizing | 0.791 | D | 0.827 | deleterious | None | None | None | None | I |
V/P | 0.9522 | likely_pathogenic | 0.9408 | pathogenic | -1.026 | Destabilizing | 0.791 | D | 0.806 | deleterious | None | None | None | None | I |
V/Q | 0.7865 | likely_pathogenic | 0.7802 | pathogenic | -1.471 | Destabilizing | 0.791 | D | 0.797 | deleterious | None | None | None | None | I |
V/R | 0.762 | likely_pathogenic | 0.772 | pathogenic | -1.084 | Destabilizing | 0.555 | D | 0.829 | deleterious | None | None | None | None | I |
V/S | 0.5953 | likely_pathogenic | 0.5503 | ambiguous | -2.038 | Highly Destabilizing | 0.555 | D | 0.802 | deleterious | None | None | None | None | I |
V/T | 0.5236 | ambiguous | 0.4773 | ambiguous | -1.825 | Destabilizing | 0.149 | N | 0.66 | neutral | None | None | None | None | I |
V/W | 0.835 | likely_pathogenic | 0.8175 | pathogenic | -1.551 | Destabilizing | 0.935 | D | 0.801 | deleterious | None | None | None | None | I |
V/Y | 0.5335 | ambiguous | 0.5121 | ambiguous | -1.217 | Destabilizing | 0.235 | N | 0.777 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.