Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2691 | 8296;8297;8298 | chr2:178771256;178771255;178771254 | chr2:179635983;179635982;179635981 |
N2AB | 2691 | 8296;8297;8298 | chr2:178771256;178771255;178771254 | chr2:179635983;179635982;179635981 |
N2A | 2691 | 8296;8297;8298 | chr2:178771256;178771255;178771254 | chr2:179635983;179635982;179635981 |
N2B | 2645 | 8158;8159;8160 | chr2:178771256;178771255;178771254 | chr2:179635983;179635982;179635981 |
Novex-1 | 2645 | 8158;8159;8160 | chr2:178771256;178771255;178771254 | chr2:179635983;179635982;179635981 |
Novex-2 | 2645 | 8158;8159;8160 | chr2:178771256;178771255;178771254 | chr2:179635983;179635982;179635981 |
Novex-3 | 2691 | 8296;8297;8298 | chr2:178771256;178771255;178771254 | chr2:179635983;179635982;179635981 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/D | rs1257930872 | None | 0.916 | N | 0.862 | 0.456 | 0.482209950775 | gnomAD-4.0.0 | 3.18125E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71318E-06 | 0 | 0 |
Y/H | None | None | 0.916 | N | 0.686 | 0.4 | 0.272205846399 | gnomAD-4.0.0 | 1.59062E-06 | None | None | None | None | N | None | 0 | 2.28686E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9744 | likely_pathogenic | 0.9698 | pathogenic | -3.142 | Highly Destabilizing | 0.399 | N | 0.819 | deleterious | None | None | None | None | N |
Y/C | 0.4857 | ambiguous | 0.4726 | ambiguous | -1.493 | Destabilizing | 0.976 | D | 0.831 | deleterious | N | 0.280051257 | None | None | N |
Y/D | 0.9946 | likely_pathogenic | 0.9928 | pathogenic | -3.498 | Highly Destabilizing | 0.916 | D | 0.862 | deleterious | N | 0.362149426 | None | None | N |
Y/E | 0.9968 | likely_pathogenic | 0.996 | pathogenic | -3.279 | Highly Destabilizing | 0.826 | D | 0.857 | deleterious | None | None | None | None | N |
Y/F | 0.133 | likely_benign | 0.1317 | benign | -1.197 | Destabilizing | 0.002 | N | 0.367 | neutral | N | 0.346163504 | None | None | N |
Y/G | 0.9711 | likely_pathogenic | 0.9658 | pathogenic | -3.555 | Highly Destabilizing | 0.826 | D | 0.857 | deleterious | None | None | None | None | N |
Y/H | 0.9232 | likely_pathogenic | 0.9122 | pathogenic | -2.258 | Highly Destabilizing | 0.916 | D | 0.686 | prob.neutral | N | 0.362149426 | None | None | N |
Y/I | 0.9266 | likely_pathogenic | 0.9131 | pathogenic | -1.754 | Destabilizing | 0.539 | D | 0.777 | deleterious | None | None | None | None | N |
Y/K | 0.9968 | likely_pathogenic | 0.9958 | pathogenic | -2.178 | Highly Destabilizing | 0.826 | D | 0.857 | deleterious | None | None | None | None | N |
Y/L | 0.8271 | likely_pathogenic | 0.8058 | pathogenic | -1.754 | Destabilizing | 0.25 | N | 0.725 | prob.delet. | None | None | None | None | N |
Y/M | 0.9463 | likely_pathogenic | 0.9363 | pathogenic | -1.368 | Destabilizing | 0.947 | D | 0.761 | deleterious | None | None | None | None | N |
Y/N | 0.9676 | likely_pathogenic | 0.956 | pathogenic | -3.001 | Highly Destabilizing | 0.916 | D | 0.842 | deleterious | N | 0.362149426 | None | None | N |
Y/P | 0.9984 | likely_pathogenic | 0.9982 | pathogenic | -2.235 | Highly Destabilizing | 0.935 | D | 0.867 | deleterious | None | None | None | None | N |
Y/Q | 0.9934 | likely_pathogenic | 0.9919 | pathogenic | -2.721 | Highly Destabilizing | 0.935 | D | 0.763 | deleterious | None | None | None | None | N |
Y/R | 0.9864 | likely_pathogenic | 0.9835 | pathogenic | -2.028 | Highly Destabilizing | 0.826 | D | 0.845 | deleterious | None | None | None | None | N |
Y/S | 0.9577 | likely_pathogenic | 0.9466 | pathogenic | -3.301 | Highly Destabilizing | 0.781 | D | 0.853 | deleterious | N | 0.362149426 | None | None | N |
Y/T | 0.9878 | likely_pathogenic | 0.9847 | pathogenic | -2.962 | Highly Destabilizing | 0.826 | D | 0.851 | deleterious | None | None | None | None | N |
Y/V | 0.852 | likely_pathogenic | 0.8278 | pathogenic | -2.235 | Highly Destabilizing | 0.25 | N | 0.763 | deleterious | None | None | None | None | N |
Y/W | 0.6788 | likely_pathogenic | 0.6974 | pathogenic | -0.463 | Destabilizing | 0.947 | D | 0.681 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.