Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26912 | 80959;80960;80961 | chr2:178565398;178565397;178565396 | chr2:179430125;179430124;179430123 |
N2AB | 25271 | 76036;76037;76038 | chr2:178565398;178565397;178565396 | chr2:179430125;179430124;179430123 |
N2A | 24344 | 73255;73256;73257 | chr2:178565398;178565397;178565396 | chr2:179430125;179430124;179430123 |
N2B | 17847 | 53764;53765;53766 | chr2:178565398;178565397;178565396 | chr2:179430125;179430124;179430123 |
Novex-1 | 17972 | 54139;54140;54141 | chr2:178565398;178565397;178565396 | chr2:179430125;179430124;179430123 |
Novex-2 | 18039 | 54340;54341;54342 | chr2:178565398;178565397;178565396 | chr2:179430125;179430124;179430123 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/Y | rs1198056349 | -0.581 | 0.873 | N | 0.553 | 0.449 | 0.450152462452 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
S/Y | rs1198056349 | -0.581 | 0.873 | N | 0.553 | 0.449 | 0.450152462452 | gnomAD-4.0.0 | 1.59171E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77454E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0758 | likely_benign | 0.0746 | benign | -0.692 | Destabilizing | None | N | 0.135 | neutral | D | 0.532638257 | None | None | N |
S/C | 0.0913 | likely_benign | 0.0914 | benign | -0.469 | Destabilizing | 0.693 | D | 0.463 | neutral | D | 0.525960807 | None | None | N |
S/D | 0.3301 | likely_benign | 0.3161 | benign | -0.153 | Destabilizing | 0.001 | N | 0.157 | neutral | None | None | None | None | N |
S/E | 0.3414 | ambiguous | 0.3352 | benign | -0.172 | Destabilizing | 0.002 | N | 0.131 | neutral | None | None | None | None | N |
S/F | 0.1275 | likely_benign | 0.1268 | benign | -0.978 | Destabilizing | 0.693 | D | 0.561 | neutral | N | 0.497728014 | None | None | N |
S/G | 0.107 | likely_benign | 0.1077 | benign | -0.919 | Destabilizing | 0.001 | N | 0.131 | neutral | None | None | None | None | N |
S/H | 0.1822 | likely_benign | 0.188 | benign | -1.402 | Destabilizing | 0.901 | D | 0.458 | neutral | None | None | None | None | N |
S/I | 0.1 | likely_benign | 0.097 | benign | -0.204 | Destabilizing | 0.006 | N | 0.302 | neutral | None | None | None | None | N |
S/K | 0.3359 | likely_benign | 0.3504 | ambiguous | -0.712 | Destabilizing | 0.148 | N | 0.383 | neutral | None | None | None | None | N |
S/L | 0.0715 | likely_benign | 0.0713 | benign | -0.204 | Destabilizing | 0.08 | N | 0.388 | neutral | None | None | None | None | N |
S/M | 0.1351 | likely_benign | 0.1291 | benign | 0.021 | Stabilizing | 0.749 | D | 0.458 | neutral | None | None | None | None | N |
S/N | 0.1049 | likely_benign | 0.1085 | benign | -0.651 | Destabilizing | 0.08 | N | 0.403 | neutral | None | None | None | None | N |
S/P | 0.8371 | likely_pathogenic | 0.8271 | pathogenic | -0.334 | Destabilizing | None | N | 0.213 | neutral | D | 0.536974717 | None | None | N |
S/Q | 0.2797 | likely_benign | 0.2775 | benign | -0.788 | Destabilizing | 0.296 | N | 0.431 | neutral | None | None | None | None | N |
S/R | 0.2653 | likely_benign | 0.2852 | benign | -0.579 | Destabilizing | 0.296 | N | 0.511 | neutral | None | None | None | None | N |
S/T | 0.0595 | likely_benign | 0.0582 | benign | -0.658 | Destabilizing | 0.002 | N | 0.131 | neutral | N | 0.430223178 | None | None | N |
S/V | 0.11 | likely_benign | 0.1039 | benign | -0.334 | Destabilizing | 0.08 | N | 0.392 | neutral | None | None | None | None | N |
S/W | 0.2846 | likely_benign | 0.2817 | benign | -0.97 | Destabilizing | 0.972 | D | 0.545 | neutral | None | None | None | None | N |
S/Y | 0.1423 | likely_benign | 0.14 | benign | -0.703 | Destabilizing | 0.873 | D | 0.553 | neutral | N | 0.499209271 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.