Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26913 | 80962;80963;80964 | chr2:178565395;178565394;178565393 | chr2:179430122;179430121;179430120 |
N2AB | 25272 | 76039;76040;76041 | chr2:178565395;178565394;178565393 | chr2:179430122;179430121;179430120 |
N2A | 24345 | 73258;73259;73260 | chr2:178565395;178565394;178565393 | chr2:179430122;179430121;179430120 |
N2B | 17848 | 53767;53768;53769 | chr2:178565395;178565394;178565393 | chr2:179430122;179430121;179430120 |
Novex-1 | 17973 | 54142;54143;54144 | chr2:178565395;178565394;178565393 | chr2:179430122;179430121;179430120 |
Novex-2 | 18040 | 54343;54344;54345 | chr2:178565395;178565394;178565393 | chr2:179430122;179430121;179430120 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/S | rs1705368893 | None | 0.967 | D | 0.841 | 0.834 | 0.95226174331 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
W/S | rs1705368893 | None | 0.967 | D | 0.841 | 0.834 | 0.95226174331 | gnomAD-4.0.0 | 6.57601E-06 | None | None | None | None | N | None | 2.41406E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/A | 0.9901 | likely_pathogenic | 0.988 | pathogenic | -2.77 | Highly Destabilizing | 0.845 | D | 0.824 | deleterious | None | None | None | None | N |
W/C | 0.9947 | likely_pathogenic | 0.9934 | pathogenic | -2.068 | Highly Destabilizing | 0.056 | N | 0.732 | prob.delet. | D | 0.721174295 | None | None | N |
W/D | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -2.911 | Highly Destabilizing | 0.996 | D | 0.828 | deleterious | None | None | None | None | N |
W/E | 0.9993 | likely_pathogenic | 0.9991 | pathogenic | -2.774 | Highly Destabilizing | 0.996 | D | 0.834 | deleterious | None | None | None | None | N |
W/F | 0.4477 | ambiguous | 0.444 | ambiguous | -1.647 | Destabilizing | 0.987 | D | 0.795 | deleterious | None | None | None | None | N |
W/G | 0.9827 | likely_pathogenic | 0.9776 | pathogenic | -3.037 | Highly Destabilizing | 0.983 | D | 0.817 | deleterious | D | 0.720972491 | None | None | N |
W/H | 0.9958 | likely_pathogenic | 0.9947 | pathogenic | -2.147 | Highly Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
W/I | 0.9303 | likely_pathogenic | 0.9125 | pathogenic | -1.775 | Destabilizing | 0.975 | D | 0.84 | deleterious | None | None | None | None | N |
W/K | 0.9996 | likely_pathogenic | 0.9994 | pathogenic | -2.581 | Highly Destabilizing | 0.987 | D | 0.834 | deleterious | None | None | None | None | N |
W/L | 0.8381 | likely_pathogenic | 0.8235 | pathogenic | -1.775 | Destabilizing | 0.805 | D | 0.805 | deleterious | D | 0.695434379 | None | None | N |
W/M | 0.9683 | likely_pathogenic | 0.9592 | pathogenic | -1.54 | Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
W/N | 0.9994 | likely_pathogenic | 0.9993 | pathogenic | -3.31 | Highly Destabilizing | 0.996 | D | 0.842 | deleterious | None | None | None | None | N |
W/P | 0.9987 | likely_pathogenic | 0.9987 | pathogenic | -2.135 | Highly Destabilizing | 0.996 | D | 0.843 | deleterious | None | None | None | None | N |
W/Q | 0.9993 | likely_pathogenic | 0.9992 | pathogenic | -3.032 | Highly Destabilizing | 0.996 | D | 0.835 | deleterious | None | None | None | None | N |
W/R | 0.9986 | likely_pathogenic | 0.9982 | pathogenic | -2.502 | Highly Destabilizing | 0.994 | D | 0.84 | deleterious | D | 0.721174295 | None | None | N |
W/S | 0.9931 | likely_pathogenic | 0.9912 | pathogenic | -3.526 | Highly Destabilizing | 0.967 | D | 0.841 | deleterious | D | 0.721174295 | None | None | N |
W/T | 0.9926 | likely_pathogenic | 0.9904 | pathogenic | -3.315 | Highly Destabilizing | 0.975 | D | 0.811 | deleterious | None | None | None | None | N |
W/V | 0.9362 | likely_pathogenic | 0.9236 | pathogenic | -2.135 | Highly Destabilizing | 0.975 | D | 0.836 | deleterious | None | None | None | None | N |
W/Y | 0.9045 | likely_pathogenic | 0.8922 | pathogenic | -1.517 | Destabilizing | 0.996 | D | 0.801 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.