Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26914 | 80965;80966;80967 | chr2:178565392;178565391;178565390 | chr2:179430119;179430118;179430117 |
N2AB | 25273 | 76042;76043;76044 | chr2:178565392;178565391;178565390 | chr2:179430119;179430118;179430117 |
N2A | 24346 | 73261;73262;73263 | chr2:178565392;178565391;178565390 | chr2:179430119;179430118;179430117 |
N2B | 17849 | 53770;53771;53772 | chr2:178565392;178565391;178565390 | chr2:179430119;179430118;179430117 |
Novex-1 | 17974 | 54145;54146;54147 | chr2:178565392;178565391;178565390 | chr2:179430119;179430118;179430117 |
Novex-2 | 18041 | 54346;54347;54348 | chr2:178565392;178565391;178565390 | chr2:179430119;179430118;179430117 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.772 | N | 0.577 | 0.215 | 0.432826170204 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 1.26695E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1054 | likely_benign | 0.1065 | benign | -1.618 | Destabilizing | 0.08 | N | 0.37 | neutral | N | 0.429637948 | None | None | N |
V/C | 0.4592 | ambiguous | 0.448 | ambiguous | -1.369 | Destabilizing | 0.965 | D | 0.535 | neutral | None | None | None | None | N |
V/D | 0.1791 | likely_benign | 0.183 | benign | -1.231 | Destabilizing | 0.326 | N | 0.563 | neutral | N | 0.442009813 | None | None | N |
V/E | 0.1172 | likely_benign | 0.1165 | benign | -1.146 | Destabilizing | 0.002 | N | 0.317 | neutral | None | None | None | None | N |
V/F | 0.0965 | likely_benign | 0.0922 | benign | -1.129 | Destabilizing | 0.772 | D | 0.577 | neutral | N | 0.389172618 | None | None | N |
V/G | 0.1274 | likely_benign | 0.1278 | benign | -2.019 | Highly Destabilizing | 0.491 | N | 0.559 | neutral | N | 0.457901985 | None | None | N |
V/H | 0.2357 | likely_benign | 0.2329 | benign | -1.601 | Destabilizing | 0.901 | D | 0.599 | neutral | None | None | None | None | N |
V/I | 0.0692 | likely_benign | 0.0675 | benign | -0.58 | Destabilizing | 0.003 | N | 0.21 | neutral | N | 0.41349506 | None | None | N |
V/K | 0.13 | likely_benign | 0.138 | benign | -1.198 | Destabilizing | 0.001 | N | 0.289 | neutral | None | None | None | None | N |
V/L | 0.0936 | likely_benign | 0.0922 | benign | -0.58 | Destabilizing | 0.029 | N | 0.386 | neutral | N | 0.345152482 | None | None | N |
V/M | 0.0735 | likely_benign | 0.0697 | benign | -0.647 | Destabilizing | 0.103 | N | 0.403 | neutral | None | None | None | None | N |
V/N | 0.1146 | likely_benign | 0.1225 | benign | -1.17 | Destabilizing | 0.561 | D | 0.594 | neutral | None | None | None | None | N |
V/P | 0.9394 | likely_pathogenic | 0.9301 | pathogenic | -0.892 | Destabilizing | 0.722 | D | 0.589 | neutral | None | None | None | None | N |
V/Q | 0.1135 | likely_benign | 0.1182 | benign | -1.202 | Destabilizing | 0.39 | N | 0.555 | neutral | None | None | None | None | N |
V/R | 0.1312 | likely_benign | 0.1383 | benign | -0.903 | Destabilizing | 0.39 | N | 0.563 | neutral | None | None | None | None | N |
V/S | 0.0929 | likely_benign | 0.0945 | benign | -1.856 | Destabilizing | 0.209 | N | 0.497 | neutral | None | None | None | None | N |
V/T | 0.091 | likely_benign | 0.0895 | benign | -1.638 | Destabilizing | 0.007 | N | 0.205 | neutral | None | None | None | None | N |
V/W | 0.5463 | ambiguous | 0.529 | ambiguous | -1.381 | Destabilizing | 0.991 | D | 0.593 | neutral | None | None | None | None | N |
V/Y | 0.2869 | likely_benign | 0.2744 | benign | -1.032 | Destabilizing | 0.901 | D | 0.581 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.