Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26918 | 80977;80978;80979 | chr2:178565380;178565379;178565378 | chr2:179430107;179430106;179430105 |
N2AB | 25277 | 76054;76055;76056 | chr2:178565380;178565379;178565378 | chr2:179430107;179430106;179430105 |
N2A | 24350 | 73273;73274;73275 | chr2:178565380;178565379;178565378 | chr2:179430107;179430106;179430105 |
N2B | 17853 | 53782;53783;53784 | chr2:178565380;178565379;178565378 | chr2:179430107;179430106;179430105 |
Novex-1 | 17978 | 54157;54158;54159 | chr2:178565380;178565379;178565378 | chr2:179430107;179430106;179430105 |
Novex-2 | 18045 | 54358;54359;54360 | chr2:178565380;178565379;178565378 | chr2:179430107;179430106;179430105 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.166 | N | 0.28 | 0.186 | 0.283371740733 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0977 | likely_benign | 0.1071 | benign | -0.294 | Destabilizing | 0.166 | N | 0.357 | neutral | N | 0.479379775 | None | None | N |
E/C | 0.4925 | ambiguous | 0.5435 | ambiguous | -0.126 | Destabilizing | 0.991 | D | 0.361 | neutral | None | None | None | None | N |
E/D | 0.1147 | likely_benign | 0.1088 | benign | -0.322 | Destabilizing | 0.166 | N | 0.275 | neutral | D | 0.52424806 | None | None | N |
E/F | 0.3746 | ambiguous | 0.3991 | ambiguous | -0.21 | Destabilizing | 0.818 | D | 0.422 | neutral | None | None | None | None | N |
E/G | 0.1112 | likely_benign | 0.1195 | benign | -0.471 | Destabilizing | 0.166 | N | 0.358 | neutral | N | 0.492714431 | None | None | N |
E/H | 0.1925 | likely_benign | 0.2277 | benign | 0.144 | Stabilizing | 0.004 | N | 0.202 | neutral | None | None | None | None | N |
E/I | 0.1054 | likely_benign | 0.1182 | benign | 0.129 | Stabilizing | 0.39 | N | 0.437 | neutral | None | None | None | None | N |
E/K | 0.0746 | likely_benign | 0.0852 | benign | 0.289 | Stabilizing | 0.166 | N | 0.28 | neutral | N | 0.453481253 | None | None | N |
E/L | 0.1317 | likely_benign | 0.1494 | benign | 0.129 | Stabilizing | 0.209 | N | 0.384 | neutral | None | None | None | None | N |
E/M | 0.1687 | likely_benign | 0.1879 | benign | 0.102 | Stabilizing | 0.901 | D | 0.375 | neutral | None | None | None | None | N |
E/N | 0.1269 | likely_benign | 0.1353 | benign | -0.009 | Destabilizing | 0.004 | N | 0.177 | neutral | None | None | None | None | N |
E/P | 0.7546 | likely_pathogenic | 0.7671 | pathogenic | 0.007 | Stabilizing | 0.722 | D | 0.419 | neutral | None | None | None | None | N |
E/Q | 0.0696 | likely_benign | 0.0776 | benign | 0.027 | Stabilizing | 0.002 | N | 0.136 | neutral | N | 0.418733961 | None | None | N |
E/R | 0.126 | likely_benign | 0.1505 | benign | 0.525 | Stabilizing | 0.39 | N | 0.217 | neutral | None | None | None | None | N |
E/S | 0.1108 | likely_benign | 0.1203 | benign | -0.158 | Destabilizing | 0.209 | N | 0.268 | neutral | None | None | None | None | N |
E/T | 0.1152 | likely_benign | 0.1248 | benign | -0.014 | Destabilizing | 0.345 | N | 0.364 | neutral | None | None | None | None | N |
E/V | 0.0801 | likely_benign | 0.0885 | benign | 0.007 | Stabilizing | 0.003 | N | 0.235 | neutral | N | 0.467856059 | None | None | N |
E/W | 0.6787 | likely_pathogenic | 0.7212 | pathogenic | -0.09 | Destabilizing | 0.991 | D | 0.368 | neutral | None | None | None | None | N |
E/Y | 0.3056 | likely_benign | 0.3349 | benign | 0.021 | Stabilizing | 0.818 | D | 0.455 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.