Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26924 | 80995;80996;80997 | chr2:178565362;178565361;178565360 | chr2:179430089;179430088;179430087 |
N2AB | 25283 | 76072;76073;76074 | chr2:178565362;178565361;178565360 | chr2:179430089;179430088;179430087 |
N2A | 24356 | 73291;73292;73293 | chr2:178565362;178565361;178565360 | chr2:179430089;179430088;179430087 |
N2B | 17859 | 53800;53801;53802 | chr2:178565362;178565361;178565360 | chr2:179430089;179430088;179430087 |
Novex-1 | 17984 | 54175;54176;54177 | chr2:178565362;178565361;178565360 | chr2:179430089;179430088;179430087 |
Novex-2 | 18051 | 54376;54377;54378 | chr2:178565362;178565361;178565360 | chr2:179430089;179430088;179430087 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | None | None | 1.0 | N | 0.605 | 0.379 | 0.267299060538 | gnomAD-4.0.0 | 1.36855E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79909E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1719 | likely_benign | 0.1673 | benign | -0.134 | Destabilizing | 0.999 | D | 0.481 | neutral | N | 0.489472899 | None | None | N |
T/C | 0.8621 | likely_pathogenic | 0.8568 | pathogenic | -0.273 | Destabilizing | 1.0 | D | 0.628 | neutral | None | None | None | None | N |
T/D | 0.8556 | likely_pathogenic | 0.819 | pathogenic | 0.029 | Stabilizing | 1.0 | D | 0.602 | neutral | None | None | None | None | N |
T/E | 0.7608 | likely_pathogenic | 0.7123 | pathogenic | -0.061 | Destabilizing | 1.0 | D | 0.606 | neutral | None | None | None | None | N |
T/F | 0.7315 | likely_pathogenic | 0.7156 | pathogenic | -0.785 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
T/G | 0.4683 | ambiguous | 0.4478 | ambiguous | -0.203 | Destabilizing | 1.0 | D | 0.595 | neutral | None | None | None | None | N |
T/H | 0.7273 | likely_pathogenic | 0.6956 | pathogenic | -0.395 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
T/I | 0.6085 | likely_pathogenic | 0.5841 | pathogenic | -0.077 | Destabilizing | 1.0 | D | 0.597 | neutral | N | 0.47131438 | None | None | N |
T/K | 0.6183 | likely_pathogenic | 0.5761 | pathogenic | -0.252 | Destabilizing | 1.0 | D | 0.605 | neutral | N | 0.476813033 | None | None | N |
T/L | 0.2491 | likely_benign | 0.2466 | benign | -0.077 | Destabilizing | 0.999 | D | 0.533 | neutral | None | None | None | None | N |
T/M | 0.1725 | likely_benign | 0.1736 | benign | -0.081 | Destabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | N |
T/N | 0.421 | ambiguous | 0.4005 | ambiguous | -0.024 | Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | N |
T/P | 0.3515 | ambiguous | 0.346 | ambiguous | -0.071 | Destabilizing | 1.0 | D | 0.605 | neutral | N | 0.484104364 | None | None | N |
T/Q | 0.5365 | ambiguous | 0.5056 | ambiguous | -0.236 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | N |
T/R | 0.5685 | likely_pathogenic | 0.5254 | ambiguous | 0.032 | Stabilizing | 1.0 | D | 0.614 | neutral | N | 0.470521778 | None | None | N |
T/S | 0.2142 | likely_benign | 0.2071 | benign | -0.183 | Destabilizing | 0.999 | D | 0.486 | neutral | N | 0.420111601 | None | None | N |
T/V | 0.3786 | ambiguous | 0.3618 | ambiguous | -0.071 | Destabilizing | 0.999 | D | 0.545 | neutral | None | None | None | None | N |
T/W | 0.9246 | likely_pathogenic | 0.9173 | pathogenic | -0.875 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
T/Y | 0.7777 | likely_pathogenic | 0.7585 | pathogenic | -0.549 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.