Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26929 | 81010;81011;81012 | chr2:178565347;178565346;178565345 | chr2:179430074;179430073;179430072 |
N2AB | 25288 | 76087;76088;76089 | chr2:178565347;178565346;178565345 | chr2:179430074;179430073;179430072 |
N2A | 24361 | 73306;73307;73308 | chr2:178565347;178565346;178565345 | chr2:179430074;179430073;179430072 |
N2B | 17864 | 53815;53816;53817 | chr2:178565347;178565346;178565345 | chr2:179430074;179430073;179430072 |
Novex-1 | 17989 | 54190;54191;54192 | chr2:178565347;178565346;178565345 | chr2:179430074;179430073;179430072 |
Novex-2 | 18056 | 54391;54392;54393 | chr2:178565347;178565346;178565345 | chr2:179430074;179430073;179430072 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs878894717 | None | 0.309 | N | 0.345 | 0.142 | None | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 9.65E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs878894717 | None | 0.309 | N | 0.345 | 0.142 | None | gnomAD-4.0.0 | 2.62961E-05 | None | None | None | None | N | None | 9.65437E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1391 | likely_benign | 0.1322 | benign | -0.658 | Destabilizing | 0.309 | N | 0.351 | neutral | D | 0.528075012 | None | None | N |
E/C | 0.7764 | likely_pathogenic | 0.7515 | pathogenic | -0.19 | Destabilizing | 0.996 | D | 0.331 | neutral | None | None | None | None | N |
E/D | 0.1668 | likely_benign | 0.1424 | benign | -0.864 | Destabilizing | 0.007 | N | 0.212 | neutral | N | 0.498445538 | None | None | N |
E/F | 0.6643 | likely_pathogenic | 0.6314 | pathogenic | -0.528 | Destabilizing | 0.91 | D | 0.347 | neutral | None | None | None | None | N |
E/G | 0.1992 | likely_benign | 0.1865 | benign | -0.939 | Destabilizing | 0.684 | D | 0.391 | neutral | D | 0.53629185 | None | None | N |
E/H | 0.3615 | ambiguous | 0.3438 | ambiguous | -0.734 | Destabilizing | 0.953 | D | 0.358 | neutral | None | None | None | None | N |
E/I | 0.2576 | likely_benign | 0.2428 | benign | 0.075 | Stabilizing | 0.835 | D | 0.363 | neutral | None | None | None | None | N |
E/K | 0.1321 | likely_benign | 0.1295 | benign | -0.324 | Destabilizing | 0.309 | N | 0.345 | neutral | N | 0.487535111 | None | None | N |
E/L | 0.3145 | likely_benign | 0.2889 | benign | 0.075 | Stabilizing | 0.009 | N | 0.297 | neutral | None | None | None | None | N |
E/M | 0.3387 | likely_benign | 0.3143 | benign | 0.469 | Stabilizing | 0.91 | D | 0.332 | neutral | None | None | None | None | N |
E/N | 0.2575 | likely_benign | 0.2293 | benign | -0.589 | Destabilizing | 0.59 | D | 0.284 | neutral | None | None | None | None | N |
E/P | 0.9175 | likely_pathogenic | 0.8947 | pathogenic | -0.148 | Destabilizing | 0.953 | D | 0.373 | neutral | None | None | None | None | N |
E/Q | 0.1157 | likely_benign | 0.1157 | benign | -0.528 | Destabilizing | 0.028 | N | 0.208 | neutral | N | 0.485959031 | None | None | N |
E/R | 0.2111 | likely_benign | 0.2091 | benign | -0.146 | Destabilizing | 0.59 | D | 0.329 | neutral | None | None | None | None | N |
E/S | 0.1689 | likely_benign | 0.1517 | benign | -0.822 | Destabilizing | 0.045 | N | 0.168 | neutral | None | None | None | None | N |
E/T | 0.1511 | likely_benign | 0.1389 | benign | -0.605 | Destabilizing | 0.59 | D | 0.361 | neutral | None | None | None | None | N |
E/V | 0.1613 | likely_benign | 0.154 | benign | -0.148 | Destabilizing | 0.521 | D | 0.389 | neutral | N | 0.513241632 | None | None | N |
E/W | 0.8408 | likely_pathogenic | 0.8158 | pathogenic | -0.394 | Destabilizing | 0.996 | D | 0.371 | neutral | None | None | None | None | N |
E/Y | 0.5666 | likely_pathogenic | 0.5441 | ambiguous | -0.31 | Destabilizing | 0.984 | D | 0.342 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.