Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26930 | 81013;81014;81015 | chr2:178565344;178565343;178565342 | chr2:179430071;179430070;179430069 |
N2AB | 25289 | 76090;76091;76092 | chr2:178565344;178565343;178565342 | chr2:179430071;179430070;179430069 |
N2A | 24362 | 73309;73310;73311 | chr2:178565344;178565343;178565342 | chr2:179430071;179430070;179430069 |
N2B | 17865 | 53818;53819;53820 | chr2:178565344;178565343;178565342 | chr2:179430071;179430070;179430069 |
Novex-1 | 17990 | 54193;54194;54195 | chr2:178565344;178565343;178565342 | chr2:179430071;179430070;179430069 |
Novex-2 | 18057 | 54394;54395;54396 | chr2:178565344;178565343;178565342 | chr2:179430071;179430070;179430069 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.005 | N | 0.366 | 0.14 | 0.28798054836 | gnomAD-4.0.0 | 1.59158E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77316E-05 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs370511450 | 0.12 | None | N | 0.263 | 0.072 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
E/K | rs370511450 | 0.12 | None | N | 0.263 | 0.072 | None | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/K | rs370511450 | 0.12 | None | N | 0.263 | 0.072 | None | gnomAD-4.0.0 | 5.57803E-06 | None | None | None | None | N | None | 1.33547E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 6.78151E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0998 | likely_benign | 0.1137 | benign | -0.578 | Destabilizing | 0.005 | N | 0.366 | neutral | N | 0.454289329 | None | None | N |
E/C | 0.5947 | likely_pathogenic | 0.6884 | pathogenic | -0.061 | Destabilizing | 0.864 | D | 0.544 | neutral | None | None | None | None | N |
E/D | 0.0955 | likely_benign | 0.0878 | benign | -0.58 | Destabilizing | None | N | 0.259 | neutral | N | 0.408365039 | None | None | N |
E/F | 0.5476 | ambiguous | 0.607 | pathogenic | -0.426 | Destabilizing | 0.628 | D | 0.569 | neutral | None | None | None | None | N |
E/G | 0.1069 | likely_benign | 0.1215 | benign | -0.825 | Destabilizing | 0.012 | N | 0.501 | neutral | N | 0.446152636 | None | None | N |
E/H | 0.287 | likely_benign | 0.346 | ambiguous | -0.488 | Destabilizing | 0.356 | N | 0.418 | neutral | None | None | None | None | N |
E/I | 0.187 | likely_benign | 0.24 | benign | 0.057 | Stabilizing | 0.072 | N | 0.583 | neutral | None | None | None | None | N |
E/K | 0.0969 | likely_benign | 0.1358 | benign | 0.128 | Stabilizing | None | N | 0.263 | neutral | N | 0.428873597 | None | None | N |
E/L | 0.239 | likely_benign | 0.2969 | benign | 0.057 | Stabilizing | 0.031 | N | 0.555 | neutral | None | None | None | None | N |
E/M | 0.2605 | likely_benign | 0.3185 | benign | 0.343 | Stabilizing | 0.356 | N | 0.554 | neutral | None | None | None | None | N |
E/N | 0.1153 | likely_benign | 0.1341 | benign | -0.23 | Destabilizing | None | N | 0.253 | neutral | None | None | None | None | N |
E/P | 0.3611 | ambiguous | 0.4323 | ambiguous | -0.134 | Destabilizing | 0.136 | N | 0.496 | neutral | None | None | None | None | N |
E/Q | 0.1038 | likely_benign | 0.1238 | benign | -0.181 | Destabilizing | 0.001 | N | 0.265 | neutral | N | 0.457849709 | None | None | N |
E/R | 0.1741 | likely_benign | 0.235 | benign | 0.26 | Stabilizing | 0.001 | N | 0.252 | neutral | None | None | None | None | N |
E/S | 0.118 | likely_benign | 0.1285 | benign | -0.414 | Destabilizing | 0.001 | N | 0.263 | neutral | None | None | None | None | N |
E/T | 0.1037 | likely_benign | 0.1192 | benign | -0.211 | Destabilizing | None | N | 0.315 | neutral | None | None | None | None | N |
E/V | 0.1183 | likely_benign | 0.1426 | benign | -0.134 | Destabilizing | 0.055 | N | 0.548 | neutral | N | 0.44784336 | None | None | N |
E/W | 0.7638 | likely_pathogenic | 0.8247 | pathogenic | -0.247 | Destabilizing | 0.864 | D | 0.551 | neutral | None | None | None | None | N |
E/Y | 0.3898 | ambiguous | 0.4663 | ambiguous | -0.176 | Destabilizing | 0.356 | N | 0.573 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.