Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26944 | 81055;81056;81057 | chr2:178565302;178565301;178565300 | chr2:179430029;179430028;179430027 |
N2AB | 25303 | 76132;76133;76134 | chr2:178565302;178565301;178565300 | chr2:179430029;179430028;179430027 |
N2A | 24376 | 73351;73352;73353 | chr2:178565302;178565301;178565300 | chr2:179430029;179430028;179430027 |
N2B | 17879 | 53860;53861;53862 | chr2:178565302;178565301;178565300 | chr2:179430029;179430028;179430027 |
Novex-1 | 18004 | 54235;54236;54237 | chr2:178565302;178565301;178565300 | chr2:179430029;179430028;179430027 |
Novex-2 | 18071 | 54436;54437;54438 | chr2:178565302;178565301;178565300 | chr2:179430029;179430028;179430027 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1199099522 | 0.414 | 0.892 | N | 0.428 | 0.252 | 0.301455362545 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/E | rs1199099522 | 0.414 | 0.892 | N | 0.428 | 0.252 | 0.301455362545 | gnomAD-4.0.0 | 3.1831E-06 | None | None | None | None | N | None | 0 | 4.5731E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.404 | ambiguous | 0.4158 | ambiguous | 0.071 | Stabilizing | 0.916 | D | 0.468 | neutral | None | None | None | None | N |
K/C | 0.7554 | likely_pathogenic | 0.7423 | pathogenic | -0.159 | Destabilizing | 0.999 | D | 0.672 | neutral | None | None | None | None | N |
K/D | 0.786 | likely_pathogenic | 0.7898 | pathogenic | -0.047 | Destabilizing | 0.987 | D | 0.588 | neutral | None | None | None | None | N |
K/E | 0.2789 | likely_benign | 0.3001 | benign | -0.045 | Destabilizing | 0.892 | D | 0.428 | neutral | N | 0.485317873 | None | None | N |
K/F | 0.8631 | likely_pathogenic | 0.8498 | pathogenic | -0.175 | Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | N |
K/G | 0.545 | ambiguous | 0.5392 | ambiguous | -0.11 | Destabilizing | 0.975 | D | 0.503 | neutral | None | None | None | None | N |
K/H | 0.428 | ambiguous | 0.4194 | ambiguous | -0.331 | Destabilizing | 0.997 | D | 0.589 | neutral | None | None | None | None | N |
K/I | 0.4096 | ambiguous | 0.4147 | ambiguous | 0.467 | Stabilizing | 0.983 | D | 0.683 | prob.neutral | N | 0.506847938 | None | None | N |
K/L | 0.4992 | ambiguous | 0.4977 | ambiguous | 0.467 | Stabilizing | 0.975 | D | 0.503 | neutral | None | None | None | None | N |
K/M | 0.3367 | likely_benign | 0.3456 | ambiguous | 0.188 | Stabilizing | 0.999 | D | 0.584 | neutral | None | None | None | None | N |
K/N | 0.6493 | likely_pathogenic | 0.6571 | pathogenic | 0.255 | Stabilizing | 0.967 | D | 0.515 | neutral | N | 0.473315843 | None | None | N |
K/P | 0.7016 | likely_pathogenic | 0.6907 | pathogenic | 0.362 | Stabilizing | 0.996 | D | 0.577 | neutral | None | None | None | None | N |
K/Q | 0.1856 | likely_benign | 0.1896 | benign | 0.1 | Stabilizing | 0.967 | D | 0.522 | neutral | N | 0.500191324 | None | None | N |
K/R | 0.0727 | likely_benign | 0.0746 | benign | 0.008 | Stabilizing | 0.025 | N | 0.243 | neutral | N | 0.414148421 | None | None | N |
K/S | 0.5579 | ambiguous | 0.5633 | ambiguous | -0.17 | Destabilizing | 0.916 | D | 0.455 | neutral | None | None | None | None | N |
K/T | 0.2682 | likely_benign | 0.2854 | benign | -0.03 | Destabilizing | 0.967 | D | 0.52 | neutral | N | 0.455589982 | None | None | N |
K/V | 0.4033 | ambiguous | 0.4051 | ambiguous | 0.362 | Stabilizing | 0.987 | D | 0.623 | neutral | None | None | None | None | N |
K/W | 0.8177 | likely_pathogenic | 0.7977 | pathogenic | -0.24 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/Y | 0.7545 | likely_pathogenic | 0.7405 | pathogenic | 0.12 | Stabilizing | 0.996 | D | 0.632 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.