Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26945 | 81058;81059;81060 | chr2:178565299;178565298;178565297 | chr2:179430026;179430025;179430024 |
N2AB | 25304 | 76135;76136;76137 | chr2:178565299;178565298;178565297 | chr2:179430026;179430025;179430024 |
N2A | 24377 | 73354;73355;73356 | chr2:178565299;178565298;178565297 | chr2:179430026;179430025;179430024 |
N2B | 17880 | 53863;53864;53865 | chr2:178565299;178565298;178565297 | chr2:179430026;179430025;179430024 |
Novex-1 | 18005 | 54238;54239;54240 | chr2:178565299;178565298;178565297 | chr2:179430026;179430025;179430024 |
Novex-2 | 18072 | 54439;54440;54441 | chr2:178565299;178565298;178565297 | chr2:179430026;179430025;179430024 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | None | None | 0.99 | N | 0.542 | 0.441 | 0.469578130381 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1101 | likely_benign | 0.1206 | benign | -0.219 | Destabilizing | 0.698 | D | 0.472 | neutral | N | 0.46886834 | None | None | N |
D/C | 0.5276 | ambiguous | 0.5207 | ambiguous | 0.174 | Stabilizing | 0.998 | D | 0.623 | neutral | None | None | None | None | N |
D/E | 0.0911 | likely_benign | 0.0939 | benign | -0.243 | Destabilizing | 0.006 | N | 0.207 | neutral | N | 0.370837574 | None | None | N |
D/F | 0.5171 | ambiguous | 0.5005 | ambiguous | -0.38 | Destabilizing | 0.993 | D | 0.545 | neutral | None | None | None | None | N |
D/G | 0.1272 | likely_benign | 0.145 | benign | -0.371 | Destabilizing | 0.822 | D | 0.44 | neutral | N | 0.488608894 | None | None | N |
D/H | 0.2874 | likely_benign | 0.2816 | benign | -0.182 | Destabilizing | 0.97 | D | 0.49 | neutral | N | 0.503386345 | None | None | N |
D/I | 0.2702 | likely_benign | 0.2703 | benign | 0.119 | Stabilizing | 0.978 | D | 0.533 | neutral | None | None | None | None | N |
D/K | 0.3038 | likely_benign | 0.3088 | benign | 0.352 | Stabilizing | 0.019 | N | 0.256 | neutral | None | None | None | None | N |
D/L | 0.3056 | likely_benign | 0.3185 | benign | 0.119 | Stabilizing | 0.956 | D | 0.439 | neutral | None | None | None | None | N |
D/M | 0.4391 | ambiguous | 0.4342 | ambiguous | 0.301 | Stabilizing | 0.998 | D | 0.537 | neutral | None | None | None | None | N |
D/N | 0.0904 | likely_benign | 0.0942 | benign | 0.226 | Stabilizing | 0.822 | D | 0.481 | neutral | N | 0.488262177 | None | None | N |
D/P | 0.7455 | likely_pathogenic | 0.7628 | pathogenic | 0.027 | Stabilizing | 0.978 | D | 0.443 | neutral | None | None | None | None | N |
D/Q | 0.2524 | likely_benign | 0.255 | benign | 0.224 | Stabilizing | 0.754 | D | 0.446 | neutral | None | None | None | None | N |
D/R | 0.3839 | ambiguous | 0.3848 | ambiguous | 0.448 | Stabilizing | 0.915 | D | 0.423 | neutral | None | None | None | None | N |
D/S | 0.1003 | likely_benign | 0.1056 | benign | 0.103 | Stabilizing | 0.86 | D | 0.455 | neutral | None | None | None | None | N |
D/T | 0.1599 | likely_benign | 0.1652 | benign | 0.213 | Stabilizing | 0.86 | D | 0.451 | neutral | None | None | None | None | N |
D/V | 0.1525 | likely_benign | 0.1578 | benign | 0.027 | Stabilizing | 0.942 | D | 0.439 | neutral | N | 0.495748297 | None | None | N |
D/W | 0.8348 | likely_pathogenic | 0.8364 | pathogenic | -0.327 | Destabilizing | 0.998 | D | 0.665 | neutral | None | None | None | None | N |
D/Y | 0.2024 | likely_benign | 0.1972 | benign | -0.166 | Destabilizing | 0.99 | D | 0.542 | neutral | N | 0.46034015 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.