Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26954 | 81085;81086;81087 | chr2:178565272;178565271;178565270 | chr2:179429999;179429998;179429997 |
N2AB | 25313 | 76162;76163;76164 | chr2:178565272;178565271;178565270 | chr2:179429999;179429998;179429997 |
N2A | 24386 | 73381;73382;73383 | chr2:178565272;178565271;178565270 | chr2:179429999;179429998;179429997 |
N2B | 17889 | 53890;53891;53892 | chr2:178565272;178565271;178565270 | chr2:179429999;179429998;179429997 |
Novex-1 | 18014 | 54265;54266;54267 | chr2:178565272;178565271;178565270 | chr2:179429999;179429998;179429997 |
Novex-2 | 18081 | 54466;54467;54468 | chr2:178565272;178565271;178565270 | chr2:179429999;179429998;179429997 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.892 | D | 0.651 | 0.662 | 0.589131389434 | gnomAD-4.0.0 | 4.77479E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71785E-06 | 0 | 3.02499E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6437 | likely_pathogenic | 0.6183 | pathogenic | -1.83 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
A/D | 0.9963 | likely_pathogenic | 0.9949 | pathogenic | -3.046 | Highly Destabilizing | 0.996 | D | 0.806 | deleterious | None | None | None | None | N |
A/E | 0.9885 | likely_pathogenic | 0.9852 | pathogenic | -2.955 | Highly Destabilizing | 0.983 | D | 0.785 | deleterious | D | 0.634155524 | None | None | N |
A/F | 0.8746 | likely_pathogenic | 0.868 | pathogenic | -0.933 | Destabilizing | 0.975 | D | 0.797 | deleterious | None | None | None | None | N |
A/G | 0.322 | likely_benign | 0.2951 | benign | -1.435 | Destabilizing | 0.944 | D | 0.631 | neutral | D | 0.564304325 | None | None | N |
A/H | 0.9941 | likely_pathogenic | 0.9924 | pathogenic | -1.464 | Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
A/I | 0.3966 | ambiguous | 0.3666 | ambiguous | -0.302 | Destabilizing | 0.845 | D | 0.683 | prob.neutral | None | None | None | None | N |
A/K | 0.9955 | likely_pathogenic | 0.9942 | pathogenic | -1.371 | Destabilizing | 0.987 | D | 0.783 | deleterious | None | None | None | None | N |
A/L | 0.3835 | ambiguous | 0.3608 | ambiguous | -0.302 | Destabilizing | 0.033 | N | 0.453 | neutral | None | None | None | None | N |
A/M | 0.5521 | ambiguous | 0.5374 | ambiguous | -0.705 | Destabilizing | 0.975 | D | 0.78 | deleterious | None | None | None | None | N |
A/N | 0.9848 | likely_pathogenic | 0.98 | pathogenic | -1.675 | Destabilizing | 0.996 | D | 0.793 | deleterious | None | None | None | None | N |
A/P | 0.9936 | likely_pathogenic | 0.9908 | pathogenic | -0.535 | Destabilizing | 0.994 | D | 0.791 | deleterious | D | 0.634155524 | None | None | N |
A/Q | 0.9779 | likely_pathogenic | 0.9731 | pathogenic | -1.729 | Destabilizing | 0.996 | D | 0.775 | deleterious | None | None | None | None | N |
A/R | 0.9886 | likely_pathogenic | 0.986 | pathogenic | -1.163 | Destabilizing | 0.987 | D | 0.784 | deleterious | None | None | None | None | N |
A/S | 0.423 | ambiguous | 0.3837 | ambiguous | -1.918 | Destabilizing | 0.944 | D | 0.625 | neutral | D | 0.601481029 | None | None | N |
A/T | 0.3825 | ambiguous | 0.3356 | benign | -1.737 | Destabilizing | 0.892 | D | 0.651 | neutral | D | 0.617298586 | None | None | N |
A/V | 0.1827 | likely_benign | 0.1656 | benign | -0.535 | Destabilizing | 0.025 | N | 0.385 | neutral | N | 0.513095278 | None | None | N |
A/W | 0.9939 | likely_pathogenic | 0.9933 | pathogenic | -1.474 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
A/Y | 0.9712 | likely_pathogenic | 0.9686 | pathogenic | -1.021 | Destabilizing | 0.987 | D | 0.801 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.