Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26956 | 81091;81092;81093 | chr2:178565266;178565265;178565264 | chr2:179429993;179429992;179429991 |
N2AB | 25315 | 76168;76169;76170 | chr2:178565266;178565265;178565264 | chr2:179429993;179429992;179429991 |
N2A | 24388 | 73387;73388;73389 | chr2:178565266;178565265;178565264 | chr2:179429993;179429992;179429991 |
N2B | 17891 | 53896;53897;53898 | chr2:178565266;178565265;178565264 | chr2:179429993;179429992;179429991 |
Novex-1 | 18016 | 54271;54272;54273 | chr2:178565266;178565265;178565264 | chr2:179429993;179429992;179429991 |
Novex-2 | 18083 | 54472;54473;54474 | chr2:178565266;178565265;178565264 | chr2:179429993;179429992;179429991 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.996 | D | 0.532 | 0.569 | 0.311387274539 | gnomAD-4.0.0 | 1.59154E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.88267E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9561 | likely_pathogenic | 0.9607 | pathogenic | -0.411 | Destabilizing | 0.994 | D | 0.572 | neutral | None | None | None | None | I |
N/C | 0.7998 | likely_pathogenic | 0.8323 | pathogenic | 0.006 | Stabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | I |
N/D | 0.9579 | likely_pathogenic | 0.9543 | pathogenic | -1.577 | Destabilizing | 0.996 | D | 0.532 | neutral | D | 0.530698433 | None | None | I |
N/E | 0.9971 | likely_pathogenic | 0.9973 | pathogenic | -1.532 | Destabilizing | 0.997 | D | 0.569 | neutral | None | None | None | None | I |
N/F | 0.9982 | likely_pathogenic | 0.9981 | pathogenic | -0.654 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
N/G | 0.9073 | likely_pathogenic | 0.9187 | pathogenic | -0.66 | Destabilizing | 0.997 | D | 0.5 | neutral | None | None | None | None | I |
N/H | 0.9336 | likely_pathogenic | 0.9366 | pathogenic | -0.68 | Destabilizing | 1.0 | D | 0.664 | neutral | D | 0.529003367 | None | None | I |
N/I | 0.9815 | likely_pathogenic | 0.9778 | pathogenic | 0.184 | Stabilizing | 0.999 | D | 0.689 | prob.neutral | D | 0.535840222 | None | None | I |
N/K | 0.9982 | likely_pathogenic | 0.9981 | pathogenic | -0.107 | Destabilizing | 0.996 | D | 0.581 | neutral | D | 0.546600643 | None | None | I |
N/L | 0.9569 | likely_pathogenic | 0.959 | pathogenic | 0.184 | Stabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
N/M | 0.9857 | likely_pathogenic | 0.9845 | pathogenic | 0.771 | Stabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | I |
N/P | 0.9962 | likely_pathogenic | 0.9954 | pathogenic | 0.014 | Stabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | I |
N/Q | 0.995 | likely_pathogenic | 0.9957 | pathogenic | -1.065 | Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | I |
N/R | 0.9955 | likely_pathogenic | 0.996 | pathogenic | 0.071 | Stabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | I |
N/S | 0.3041 | likely_benign | 0.3364 | benign | -0.631 | Destabilizing | 0.905 | D | 0.299 | neutral | N | 0.482613412 | None | None | I |
N/T | 0.7929 | likely_pathogenic | 0.7924 | pathogenic | -0.446 | Destabilizing | 0.992 | D | 0.557 | neutral | D | 0.539345714 | None | None | I |
N/V | 0.9559 | likely_pathogenic | 0.959 | pathogenic | 0.014 | Stabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | I |
N/W | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -0.579 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | I |
N/Y | 0.9849 | likely_pathogenic | 0.9847 | pathogenic | -0.222 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | D | 0.558463927 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.