Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26957 | 81094;81095;81096 | chr2:178565263;178565262;178565261 | chr2:179429990;179429989;179429988 |
N2AB | 25316 | 76171;76172;76173 | chr2:178565263;178565262;178565261 | chr2:179429990;179429989;179429988 |
N2A | 24389 | 73390;73391;73392 | chr2:178565263;178565262;178565261 | chr2:179429990;179429989;179429988 |
N2B | 17892 | 53899;53900;53901 | chr2:178565263;178565262;178565261 | chr2:179429990;179429989;179429988 |
Novex-1 | 18017 | 54274;54275;54276 | chr2:178565263;178565262;178565261 | chr2:179429990;179429989;179429988 |
Novex-2 | 18084 | 54475;54476;54477 | chr2:178565263;178565262;178565261 | chr2:179429990;179429989;179429988 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.003 | N | 0.159 | 0.086 | 0.0954503805726 | gnomAD-4.0.0 | 1.59154E-06 | None | None | None | None | I | None | 0 | 2.28676E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0675 | likely_benign | 0.0683 | benign | -0.19 | Destabilizing | 0.004 | N | 0.169 | neutral | None | None | None | None | I |
S/C | 0.1321 | likely_benign | 0.1279 | benign | -0.463 | Destabilizing | 0.983 | D | 0.324 | neutral | N | 0.521085735 | None | None | I |
S/D | 0.3452 | ambiguous | 0.3534 | ambiguous | -0.15 | Destabilizing | 0.59 | D | 0.231 | neutral | None | None | None | None | I |
S/E | 0.4075 | ambiguous | 0.4333 | ambiguous | -0.262 | Destabilizing | 0.742 | D | 0.239 | neutral | None | None | None | None | I |
S/F | 0.1739 | likely_benign | 0.1725 | benign | -0.954 | Destabilizing | 0.953 | D | 0.453 | neutral | None | None | None | None | I |
S/G | 0.0862 | likely_benign | 0.0851 | benign | -0.213 | Destabilizing | 0.309 | N | 0.293 | neutral | D | 0.537929433 | None | None | I |
S/H | 0.2895 | likely_benign | 0.2998 | benign | -0.529 | Destabilizing | 0.953 | D | 0.327 | neutral | None | None | None | None | I |
S/I | 0.1006 | likely_benign | 0.0974 | benign | -0.258 | Destabilizing | 0.884 | D | 0.449 | neutral | N | 0.518516953 | None | None | I |
S/K | 0.4355 | ambiguous | 0.461 | ambiguous | -0.466 | Destabilizing | 0.742 | D | 0.247 | neutral | None | None | None | None | I |
S/L | 0.0764 | likely_benign | 0.0725 | benign | -0.258 | Destabilizing | 0.59 | D | 0.389 | neutral | None | None | None | None | I |
S/M | 0.1401 | likely_benign | 0.1385 | benign | -0.214 | Destabilizing | 0.984 | D | 0.326 | neutral | None | None | None | None | I |
S/N | 0.1093 | likely_benign | 0.1089 | benign | -0.259 | Destabilizing | 0.003 | N | 0.159 | neutral | N | 0.487470891 | None | None | I |
S/P | 0.1819 | likely_benign | 0.1785 | benign | -0.213 | Destabilizing | 0.953 | D | 0.338 | neutral | None | None | None | None | I |
S/Q | 0.3746 | ambiguous | 0.3916 | ambiguous | -0.483 | Destabilizing | 0.91 | D | 0.287 | neutral | None | None | None | None | I |
S/R | 0.3897 | ambiguous | 0.4045 | ambiguous | -0.214 | Destabilizing | 0.684 | D | 0.359 | neutral | N | 0.490825026 | None | None | I |
S/T | 0.0637 | likely_benign | 0.0641 | benign | -0.364 | Destabilizing | 0.012 | N | 0.152 | neutral | N | 0.51082019 | None | None | I |
S/V | 0.1137 | likely_benign | 0.1107 | benign | -0.213 | Destabilizing | 0.59 | D | 0.403 | neutral | None | None | None | None | I |
S/W | 0.3688 | ambiguous | 0.3688 | ambiguous | -1.048 | Destabilizing | 0.996 | D | 0.515 | neutral | None | None | None | None | I |
S/Y | 0.1976 | likely_benign | 0.1964 | benign | -0.736 | Destabilizing | 0.984 | D | 0.452 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.