Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26962 | 81109;81110;81111 | chr2:178565248;178565247;178565246 | chr2:179429975;179429974;179429973 |
N2AB | 25321 | 76186;76187;76188 | chr2:178565248;178565247;178565246 | chr2:179429975;179429974;179429973 |
N2A | 24394 | 73405;73406;73407 | chr2:178565248;178565247;178565246 | chr2:179429975;179429974;179429973 |
N2B | 17897 | 53914;53915;53916 | chr2:178565248;178565247;178565246 | chr2:179429975;179429974;179429973 |
Novex-1 | 18022 | 54289;54290;54291 | chr2:178565248;178565247;178565246 | chr2:179429975;179429974;179429973 |
Novex-2 | 18089 | 54490;54491;54492 | chr2:178565248;178565247;178565246 | chr2:179429975;179429974;179429973 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.201 | D | 0.435 | 0.169 | 0.251639045875 | gnomAD-4.0.0 | 1.36855E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79905E-06 | 0 | 0 |
T/I | rs778900963 | 0.086 | 0.009 | N | 0.309 | 0.369 | 0.32306181527 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
T/I | rs778900963 | 0.086 | 0.009 | N | 0.309 | 0.369 | 0.32306181527 | gnomAD-4.0.0 | 1.36855E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99533E-07 | 1.15947E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0771 | likely_benign | 0.0834 | benign | -0.587 | Destabilizing | 0.201 | N | 0.435 | neutral | D | 0.531214105 | None | None | I |
T/C | 0.3643 | ambiguous | 0.3895 | ambiguous | -0.319 | Destabilizing | 0.992 | D | 0.587 | neutral | None | None | None | None | I |
T/D | 0.39 | ambiguous | 0.4152 | ambiguous | -0.168 | Destabilizing | 0.617 | D | 0.529 | neutral | None | None | None | None | I |
T/E | 0.2223 | likely_benign | 0.24 | benign | -0.217 | Destabilizing | 0.617 | D | 0.521 | neutral | None | None | None | None | I |
T/F | 0.2524 | likely_benign | 0.2654 | benign | -0.858 | Destabilizing | 0.85 | D | 0.649 | neutral | None | None | None | None | I |
T/G | 0.2351 | likely_benign | 0.2585 | benign | -0.784 | Destabilizing | 0.447 | N | 0.517 | neutral | None | None | None | None | I |
T/H | 0.2429 | likely_benign | 0.2567 | benign | -1.098 | Destabilizing | 0.992 | D | 0.639 | neutral | None | None | None | None | I |
T/I | 0.1476 | likely_benign | 0.1496 | benign | -0.171 | Destabilizing | 0.009 | N | 0.309 | neutral | N | 0.497612655 | None | None | I |
T/K | 0.1384 | likely_benign | 0.1469 | benign | -0.646 | Destabilizing | 0.549 | D | 0.526 | neutral | D | 0.53619585 | None | None | I |
T/L | 0.1162 | likely_benign | 0.1187 | benign | -0.171 | Destabilizing | 0.217 | N | 0.482 | neutral | None | None | None | None | I |
T/M | 0.0893 | likely_benign | 0.0913 | benign | 0.135 | Stabilizing | 0.955 | D | 0.59 | neutral | None | None | None | None | I |
T/N | 0.1549 | likely_benign | 0.1578 | benign | -0.441 | Destabilizing | 0.85 | D | 0.469 | neutral | None | None | None | None | I |
T/P | 0.4072 | ambiguous | 0.4438 | ambiguous | -0.279 | Destabilizing | 0.009 | N | 0.295 | neutral | D | 0.5272378 | None | None | I |
T/Q | 0.1654 | likely_benign | 0.1762 | benign | -0.684 | Destabilizing | 0.92 | D | 0.605 | neutral | None | None | None | None | I |
T/R | 0.1246 | likely_benign | 0.1302 | benign | -0.332 | Destabilizing | 0.81 | D | 0.599 | neutral | D | 0.531926181 | None | None | I |
T/S | 0.0934 | likely_benign | 0.0977 | benign | -0.667 | Destabilizing | 0.016 | N | 0.167 | neutral | N | 0.45656163 | None | None | I |
T/V | 0.1036 | likely_benign | 0.1052 | benign | -0.279 | Destabilizing | 0.217 | N | 0.419 | neutral | None | None | None | None | I |
T/W | 0.5909 | likely_pathogenic | 0.6262 | pathogenic | -0.813 | Destabilizing | 0.992 | D | 0.683 | prob.neutral | None | None | None | None | I |
T/Y | 0.3167 | likely_benign | 0.3318 | benign | -0.575 | Destabilizing | 0.92 | D | 0.652 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.