Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26963 | 81112;81113;81114 | chr2:178565245;178565244;178565243 | chr2:179429972;179429971;179429970 |
N2AB | 25322 | 76189;76190;76191 | chr2:178565245;178565244;178565243 | chr2:179429972;179429971;179429970 |
N2A | 24395 | 73408;73409;73410 | chr2:178565245;178565244;178565243 | chr2:179429972;179429971;179429970 |
N2B | 17898 | 53917;53918;53919 | chr2:178565245;178565244;178565243 | chr2:179429972;179429971;179429970 |
Novex-1 | 18023 | 54292;54293;54294 | chr2:178565245;178565244;178565243 | chr2:179429972;179429971;179429970 |
Novex-2 | 18090 | 54493;54494;54495 | chr2:178565245;178565244;178565243 | chr2:179429972;179429971;179429970 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1705288214 | None | 0.904 | N | 0.602 | 0.241 | 0.455173453901 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/D | rs1705288214 | None | 0.904 | N | 0.602 | 0.241 | 0.455173453901 | gnomAD-4.0.0 | 6.57514E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47054E-05 | 0 | 0 |
E/Q | rs1705290908 | None | 0.97 | N | 0.691 | 0.269 | 0.370240404367 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/Q | rs1705290908 | None | 0.97 | N | 0.691 | 0.269 | 0.370240404367 | gnomAD-4.0.0 | 6.57436E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47029E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1273 | likely_benign | 0.1385 | benign | -0.513 | Destabilizing | 0.014 | N | 0.468 | neutral | N | 0.379308781 | None | None | N |
E/C | 0.7983 | likely_pathogenic | 0.8181 | pathogenic | -0.142 | Destabilizing | 0.998 | D | 0.789 | deleterious | None | None | None | None | N |
E/D | 0.1998 | likely_benign | 0.2031 | benign | -0.939 | Destabilizing | 0.904 | D | 0.602 | neutral | N | 0.518455451 | None | None | N |
E/F | 0.8231 | likely_pathogenic | 0.8409 | pathogenic | 0.046 | Stabilizing | 0.956 | D | 0.816 | deleterious | None | None | None | None | N |
E/G | 0.1306 | likely_benign | 0.1449 | benign | -0.869 | Destabilizing | 0.698 | D | 0.723 | prob.delet. | N | 0.484228234 | None | None | N |
E/H | 0.5383 | ambiguous | 0.5709 | pathogenic | -0.136 | Destabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/I | 0.5056 | ambiguous | 0.5236 | ambiguous | 0.445 | Stabilizing | 0.915 | D | 0.781 | deleterious | None | None | None | None | N |
E/K | 0.1798 | likely_benign | 0.1952 | benign | 0.077 | Stabilizing | 0.822 | D | 0.633 | neutral | N | 0.480646424 | None | None | N |
E/L | 0.5541 | ambiguous | 0.5814 | pathogenic | 0.445 | Stabilizing | 0.754 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/M | 0.5618 | ambiguous | 0.5772 | pathogenic | 0.742 | Stabilizing | 0.994 | D | 0.756 | deleterious | None | None | None | None | N |
E/N | 0.3438 | ambiguous | 0.3623 | ambiguous | -0.57 | Destabilizing | 0.978 | D | 0.704 | prob.neutral | None | None | None | None | N |
E/P | 0.9639 | likely_pathogenic | 0.9686 | pathogenic | 0.149 | Stabilizing | 0.978 | D | 0.745 | deleterious | None | None | None | None | N |
E/Q | 0.1456 | likely_benign | 0.1553 | benign | -0.424 | Destabilizing | 0.97 | D | 0.691 | prob.neutral | N | 0.518455451 | None | None | N |
E/R | 0.3115 | likely_benign | 0.3407 | ambiguous | 0.276 | Stabilizing | 0.978 | D | 0.704 | prob.neutral | None | None | None | None | N |
E/S | 0.2056 | likely_benign | 0.2132 | benign | -0.792 | Destabilizing | 0.754 | D | 0.633 | neutral | None | None | None | None | N |
E/T | 0.2496 | likely_benign | 0.267 | benign | -0.48 | Destabilizing | 0.86 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/V | 0.2791 | likely_benign | 0.2913 | benign | 0.149 | Stabilizing | 0.014 | N | 0.583 | neutral | N | 0.447093998 | None | None | N |
E/W | 0.9308 | likely_pathogenic | 0.9426 | pathogenic | 0.313 | Stabilizing | 0.998 | D | 0.767 | deleterious | None | None | None | None | N |
E/Y | 0.7051 | likely_pathogenic | 0.7257 | pathogenic | 0.344 | Stabilizing | 0.978 | D | 0.769 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.