Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26965 | 81118;81119;81120 | chr2:178565239;178565238;178565237 | chr2:179429966;179429965;179429964 |
N2AB | 25324 | 76195;76196;76197 | chr2:178565239;178565238;178565237 | chr2:179429966;179429965;179429964 |
N2A | 24397 | 73414;73415;73416 | chr2:178565239;178565238;178565237 | chr2:179429966;179429965;179429964 |
N2B | 17900 | 53923;53924;53925 | chr2:178565239;178565238;178565237 | chr2:179429966;179429965;179429964 |
Novex-1 | 18025 | 54298;54299;54300 | chr2:178565239;178565238;178565237 | chr2:179429966;179429965;179429964 |
Novex-2 | 18092 | 54499;54500;54501 | chr2:178565239;178565238;178565237 | chr2:179429966;179429965;179429964 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/H | None | None | 0.997 | N | 0.804 | 0.645 | 0.871386344034 | gnomAD-4.0.0 | 1.59166E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85881E-06 | 0 | 0 |
L/V | rs1186366124 | -0.89 | 0.006 | N | 0.183 | 0.123 | 0.52586976336 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/V | rs1186366124 | -0.89 | 0.006 | N | 0.183 | 0.123 | 0.52586976336 | gnomAD-4.0.0 | 1.59165E-06 | None | None | None | None | N | None | 0 | 2.28697E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7033 | likely_pathogenic | 0.6852 | pathogenic | -2.435 | Highly Destabilizing | 0.559 | D | 0.639 | neutral | None | None | None | None | N |
L/C | 0.6192 | likely_pathogenic | 0.6324 | pathogenic | -1.855 | Destabilizing | 0.998 | D | 0.731 | prob.delet. | None | None | None | None | N |
L/D | 0.995 | likely_pathogenic | 0.9955 | pathogenic | -2.797 | Highly Destabilizing | 0.993 | D | 0.835 | deleterious | None | None | None | None | N |
L/E | 0.9791 | likely_pathogenic | 0.9797 | pathogenic | -2.466 | Highly Destabilizing | 0.978 | D | 0.827 | deleterious | None | None | None | None | N |
L/F | 0.2034 | likely_benign | 0.222 | benign | -1.454 | Destabilizing | 0.942 | D | 0.678 | prob.neutral | N | 0.459121933 | None | None | N |
L/G | 0.947 | likely_pathogenic | 0.9455 | pathogenic | -3.076 | Highly Destabilizing | 0.978 | D | 0.817 | deleterious | None | None | None | None | N |
L/H | 0.8977 | likely_pathogenic | 0.914 | pathogenic | -2.845 | Highly Destabilizing | 0.997 | D | 0.804 | deleterious | N | 0.501008628 | None | None | N |
L/I | 0.0619 | likely_benign | 0.061 | benign | -0.52 | Destabilizing | 0.006 | N | 0.178 | neutral | N | 0.36776921 | None | None | N |
L/K | 0.9696 | likely_pathogenic | 0.9699 | pathogenic | -1.665 | Destabilizing | 0.978 | D | 0.781 | deleterious | None | None | None | None | N |
L/M | 0.1589 | likely_benign | 0.1545 | benign | -0.783 | Destabilizing | 0.956 | D | 0.683 | prob.neutral | None | None | None | None | N |
L/N | 0.9658 | likely_pathogenic | 0.9653 | pathogenic | -2.321 | Highly Destabilizing | 0.993 | D | 0.835 | deleterious | None | None | None | None | N |
L/P | 0.9773 | likely_pathogenic | 0.9761 | pathogenic | -1.146 | Destabilizing | 0.99 | D | 0.829 | deleterious | N | 0.507323119 | None | None | N |
L/Q | 0.9122 | likely_pathogenic | 0.9182 | pathogenic | -1.939 | Destabilizing | 0.993 | D | 0.787 | deleterious | None | None | None | None | N |
L/R | 0.9332 | likely_pathogenic | 0.9402 | pathogenic | -1.856 | Destabilizing | 0.97 | D | 0.778 | deleterious | N | 0.50706963 | None | None | N |
L/S | 0.9143 | likely_pathogenic | 0.9154 | pathogenic | -3.002 | Highly Destabilizing | 0.978 | D | 0.768 | deleterious | None | None | None | None | N |
L/T | 0.7302 | likely_pathogenic | 0.7155 | pathogenic | -2.487 | Highly Destabilizing | 0.86 | D | 0.712 | prob.delet. | None | None | None | None | N |
L/V | 0.0811 | likely_benign | 0.0811 | benign | -1.146 | Destabilizing | 0.006 | N | 0.183 | neutral | N | 0.416925807 | None | None | N |
L/W | 0.7511 | likely_pathogenic | 0.7879 | pathogenic | -1.824 | Destabilizing | 0.998 | D | 0.771 | deleterious | None | None | None | None | N |
L/Y | 0.7869 | likely_pathogenic | 0.8001 | pathogenic | -1.559 | Destabilizing | 0.978 | D | 0.781 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.