Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2697 | 8314;8315;8316 | chr2:178771238;178771237;178771236 | chr2:179635965;179635964;179635963 |
N2AB | 2697 | 8314;8315;8316 | chr2:178771238;178771237;178771236 | chr2:179635965;179635964;179635963 |
N2A | 2697 | 8314;8315;8316 | chr2:178771238;178771237;178771236 | chr2:179635965;179635964;179635963 |
N2B | 2651 | 8176;8177;8178 | chr2:178771238;178771237;178771236 | chr2:179635965;179635964;179635963 |
Novex-1 | 2651 | 8176;8177;8178 | chr2:178771238;178771237;178771236 | chr2:179635965;179635964;179635963 |
Novex-2 | 2651 | 8176;8177;8178 | chr2:178771238;178771237;178771236 | chr2:179635965;179635964;179635963 |
Novex-3 | 2697 | 8314;8315;8316 | chr2:178771238;178771237;178771236 | chr2:179635965;179635964;179635963 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | None | None | 0.82 | D | 0.741 | 0.316 | 0.470730462751 | gnomAD-4.0.0 | 6.84104E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99313E-07 | 0 | 0 |
K/R | None | None | 0.565 | N | 0.663 | 0.155 | 0.344251166708 | gnomAD-4.0.0 | 6.84104E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99313E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.312 | likely_benign | 0.3084 | benign | -0.09 | Destabilizing | 0.633 | D | 0.703 | prob.neutral | None | None | None | None | N |
K/C | 0.7333 | likely_pathogenic | 0.681 | pathogenic | -0.293 | Destabilizing | 0.996 | D | 0.727 | prob.delet. | None | None | None | None | N |
K/D | 0.6406 | likely_pathogenic | 0.6281 | pathogenic | 0.252 | Stabilizing | 0.923 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/E | 0.137 | likely_benign | 0.1329 | benign | 0.268 | Stabilizing | 0.565 | D | 0.691 | prob.neutral | N | 0.493325179 | None | None | N |
K/F | 0.737 | likely_pathogenic | 0.7085 | pathogenic | -0.277 | Destabilizing | 0.961 | D | 0.731 | prob.delet. | None | None | None | None | N |
K/G | 0.5037 | ambiguous | 0.4961 | ambiguous | -0.305 | Destabilizing | 0.775 | D | 0.719 | prob.delet. | None | None | None | None | N |
K/H | 0.3472 | ambiguous | 0.3282 | benign | -0.597 | Destabilizing | 0.989 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/I | 0.2883 | likely_benign | 0.2562 | benign | 0.397 | Stabilizing | 0.82 | D | 0.741 | deleterious | D | 0.566477477 | None | None | N |
K/L | 0.355 | ambiguous | 0.342 | ambiguous | 0.397 | Stabilizing | 0.633 | D | 0.718 | prob.delet. | None | None | None | None | N |
K/M | 0.1934 | likely_benign | 0.1748 | benign | 0.245 | Stabilizing | 0.989 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/N | 0.4243 | ambiguous | 0.4103 | ambiguous | 0.185 | Stabilizing | 0.901 | D | 0.69 | prob.neutral | N | 0.50859011 | None | None | N |
K/P | 0.9139 | likely_pathogenic | 0.9005 | pathogenic | 0.264 | Stabilizing | 0.961 | D | 0.745 | deleterious | None | None | None | None | N |
K/Q | 0.1118 | likely_benign | 0.1085 | benign | None | Stabilizing | 0.075 | N | 0.351 | neutral | N | 0.499831619 | None | None | N |
K/R | 0.0908 | likely_benign | 0.0869 | benign | -0.039 | Destabilizing | 0.565 | D | 0.663 | neutral | N | 0.509747634 | None | None | N |
K/S | 0.3425 | ambiguous | 0.3334 | benign | -0.389 | Destabilizing | 0.633 | D | 0.696 | prob.neutral | None | None | None | None | N |
K/T | 0.1315 | likely_benign | 0.1234 | benign | -0.214 | Destabilizing | 0.008 | N | 0.452 | neutral | N | 0.482003615 | None | None | N |
K/V | 0.2497 | likely_benign | 0.2252 | benign | 0.264 | Stabilizing | 0.858 | D | 0.723 | prob.delet. | None | None | None | None | N |
K/W | 0.7947 | likely_pathogenic | 0.7674 | pathogenic | -0.24 | Destabilizing | 0.996 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/Y | 0.6418 | likely_pathogenic | 0.6013 | pathogenic | 0.117 | Stabilizing | 0.987 | D | 0.747 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.