Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26972 | 81139;81140;81141 | chr2:178565218;178565217;178565216 | chr2:179429945;179429944;179429943 |
N2AB | 25331 | 76216;76217;76218 | chr2:178565218;178565217;178565216 | chr2:179429945;179429944;179429943 |
N2A | 24404 | 73435;73436;73437 | chr2:178565218;178565217;178565216 | chr2:179429945;179429944;179429943 |
N2B | 17907 | 53944;53945;53946 | chr2:178565218;178565217;178565216 | chr2:179429945;179429944;179429943 |
Novex-1 | 18032 | 54319;54320;54321 | chr2:178565218;178565217;178565216 | chr2:179429945;179429944;179429943 |
Novex-2 | 18099 | 54520;54521;54522 | chr2:178565218;178565217;178565216 | chr2:179429945;179429944;179429943 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1705272007 | None | 0.027 | N | 0.243 | 0.082 | 0.222439326576 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs1705272007 | None | 0.027 | N | 0.243 | 0.082 | 0.222439326576 | gnomAD-4.0.0 | 6.57358E-06 | None | None | None | None | I | None | 2.41289E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6805 | likely_pathogenic | 0.6941 | pathogenic | -0.217 | Destabilizing | 0.717 | D | 0.534 | neutral | None | None | None | None | I |
K/C | 0.8479 | likely_pathogenic | 0.8426 | pathogenic | -0.391 | Destabilizing | 0.998 | D | 0.898 | deleterious | None | None | None | None | I |
K/D | 0.9378 | likely_pathogenic | 0.9404 | pathogenic | 0.383 | Stabilizing | 0.973 | D | 0.625 | neutral | None | None | None | None | I |
K/E | 0.5618 | ambiguous | 0.5969 | pathogenic | 0.414 | Stabilizing | 0.792 | D | 0.499 | neutral | N | 0.487318722 | None | None | I |
K/F | 0.9462 | likely_pathogenic | 0.9486 | pathogenic | -0.317 | Destabilizing | 0.947 | D | 0.881 | deleterious | None | None | None | None | I |
K/G | 0.8544 | likely_pathogenic | 0.855 | pathogenic | -0.454 | Destabilizing | 0.973 | D | 0.539 | neutral | None | None | None | None | I |
K/H | 0.6288 | likely_pathogenic | 0.6106 | pathogenic | -0.713 | Destabilizing | 0.993 | D | 0.609 | neutral | None | None | None | None | I |
K/I | 0.539 | ambiguous | 0.5828 | pathogenic | 0.337 | Stabilizing | 0.899 | D | 0.608 | neutral | None | None | None | None | I |
K/L | 0.675 | likely_pathogenic | 0.6793 | pathogenic | 0.337 | Stabilizing | 0.717 | D | 0.551 | neutral | None | None | None | None | I |
K/M | 0.4311 | ambiguous | 0.4603 | ambiguous | 0.204 | Stabilizing | 0.99 | D | 0.615 | neutral | N | 0.494409066 | None | None | I |
K/N | 0.7787 | likely_pathogenic | 0.7919 | pathogenic | 0.112 | Stabilizing | 0.931 | D | 0.636 | neutral | N | 0.487825701 | None | None | I |
K/P | 0.7189 | likely_pathogenic | 0.7302 | pathogenic | 0.182 | Stabilizing | 0.991 | D | 0.679 | prob.neutral | None | None | None | None | I |
K/Q | 0.3014 | likely_benign | 0.2953 | benign | -0.071 | Destabilizing | 0.931 | D | 0.676 | prob.neutral | N | 0.494409066 | None | None | I |
K/R | 0.1161 | likely_benign | 0.1111 | benign | -0.09 | Destabilizing | 0.027 | N | 0.243 | neutral | N | 0.475428953 | None | None | I |
K/S | 0.8143 | likely_pathogenic | 0.8095 | pathogenic | -0.543 | Destabilizing | 0.835 | D | 0.632 | neutral | None | None | None | None | I |
K/T | 0.4815 | ambiguous | 0.4957 | ambiguous | -0.341 | Destabilizing | 0.792 | D | 0.613 | neutral | N | 0.459161608 | None | None | I |
K/V | 0.5392 | ambiguous | 0.5636 | ambiguous | 0.182 | Stabilizing | 0.035 | N | 0.425 | neutral | None | None | None | None | I |
K/W | 0.9544 | likely_pathogenic | 0.9527 | pathogenic | -0.226 | Destabilizing | 0.998 | D | 0.903 | deleterious | None | None | None | None | I |
K/Y | 0.8603 | likely_pathogenic | 0.8611 | pathogenic | 0.107 | Stabilizing | 0.973 | D | 0.895 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.