Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26985 | 81178;81179;81180 | chr2:178565179;178565178;178565177 | chr2:179429906;179429905;179429904 |
N2AB | 25344 | 76255;76256;76257 | chr2:178565179;178565178;178565177 | chr2:179429906;179429905;179429904 |
N2A | 24417 | 73474;73475;73476 | chr2:178565179;178565178;178565177 | chr2:179429906;179429905;179429904 |
N2B | 17920 | 53983;53984;53985 | chr2:178565179;178565178;178565177 | chr2:179429906;179429905;179429904 |
Novex-1 | 18045 | 54358;54359;54360 | chr2:178565179;178565178;178565177 | chr2:179429906;179429905;179429904 |
Novex-2 | 18112 | 54559;54560;54561 | chr2:178565179;178565178;178565177 | chr2:179429906;179429905;179429904 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.942 | N | 0.747 | 0.324 | 0.662129232514 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4888 | ambiguous | 0.4249 | ambiguous | -1.516 | Destabilizing | 0.822 | D | 0.439 | neutral | N | 0.486438527 | None | None | N |
V/C | 0.8487 | likely_pathogenic | 0.8144 | pathogenic | -1.097 | Destabilizing | 0.998 | D | 0.721 | prob.delet. | None | None | None | None | N |
V/D | 0.8724 | likely_pathogenic | 0.7997 | pathogenic | -1.506 | Destabilizing | 0.99 | D | 0.827 | deleterious | N | 0.520609576 | None | None | N |
V/E | 0.7107 | likely_pathogenic | 0.6034 | pathogenic | -1.361 | Destabilizing | 0.993 | D | 0.769 | deleterious | None | None | None | None | N |
V/F | 0.4158 | ambiguous | 0.3474 | ambiguous | -0.867 | Destabilizing | 0.942 | D | 0.747 | deleterious | N | 0.482047662 | None | None | N |
V/G | 0.6469 | likely_pathogenic | 0.5978 | pathogenic | -1.972 | Destabilizing | 0.971 | D | 0.808 | deleterious | N | 0.513229743 | None | None | N |
V/H | 0.8982 | likely_pathogenic | 0.8379 | pathogenic | -1.715 | Destabilizing | 0.998 | D | 0.808 | deleterious | None | None | None | None | N |
V/I | 0.0666 | likely_benign | 0.064 | benign | -0.299 | Destabilizing | 0.014 | N | 0.21 | neutral | N | 0.475325457 | None | None | N |
V/K | 0.7233 | likely_pathogenic | 0.6186 | pathogenic | -1.189 | Destabilizing | 0.978 | D | 0.772 | deleterious | None | None | None | None | N |
V/L | 0.3464 | ambiguous | 0.2812 | benign | -0.299 | Destabilizing | 0.247 | N | 0.327 | neutral | N | 0.485424569 | None | None | N |
V/M | 0.256 | likely_benign | 0.2036 | benign | -0.402 | Destabilizing | 0.956 | D | 0.65 | neutral | None | None | None | None | N |
V/N | 0.7275 | likely_pathogenic | 0.6084 | pathogenic | -1.277 | Destabilizing | 0.993 | D | 0.819 | deleterious | None | None | None | None | N |
V/P | 0.9404 | likely_pathogenic | 0.9176 | pathogenic | -0.672 | Destabilizing | 0.993 | D | 0.793 | deleterious | None | None | None | None | N |
V/Q | 0.7317 | likely_pathogenic | 0.6086 | pathogenic | -1.206 | Destabilizing | 0.993 | D | 0.785 | deleterious | None | None | None | None | N |
V/R | 0.7183 | likely_pathogenic | 0.619 | pathogenic | -1.017 | Destabilizing | 0.978 | D | 0.817 | deleterious | None | None | None | None | N |
V/S | 0.6456 | likely_pathogenic | 0.5518 | ambiguous | -1.906 | Destabilizing | 0.978 | D | 0.765 | deleterious | None | None | None | None | N |
V/T | 0.4625 | ambiguous | 0.3774 | ambiguous | -1.63 | Destabilizing | 0.86 | D | 0.54 | neutral | None | None | None | None | N |
V/W | 0.9537 | likely_pathogenic | 0.9335 | pathogenic | -1.285 | Destabilizing | 0.998 | D | 0.804 | deleterious | None | None | None | None | N |
V/Y | 0.7901 | likely_pathogenic | 0.7281 | pathogenic | -0.874 | Destabilizing | 0.978 | D | 0.765 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.