Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26991 | 81196;81197;81198 | chr2:178565161;178565160;178565159 | chr2:179429888;179429887;179429886 |
N2AB | 25350 | 76273;76274;76275 | chr2:178565161;178565160;178565159 | chr2:179429888;179429887;179429886 |
N2A | 24423 | 73492;73493;73494 | chr2:178565161;178565160;178565159 | chr2:179429888;179429887;179429886 |
N2B | 17926 | 54001;54002;54003 | chr2:178565161;178565160;178565159 | chr2:179429888;179429887;179429886 |
Novex-1 | 18051 | 54376;54377;54378 | chr2:178565161;178565160;178565159 | chr2:179429888;179429887;179429886 |
Novex-2 | 18118 | 54577;54578;54579 | chr2:178565161;178565160;178565159 | chr2:179429888;179429887;179429886 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1362572333 | -0.489 | 0.004 | N | 0.235 | 0.098 | 0.411799315854 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14784E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.235 | likely_benign | 0.1946 | benign | -1.988 | Destabilizing | 0.201 | N | 0.369 | neutral | N | 0.475306815 | None | None | N |
V/C | 0.6869 | likely_pathogenic | 0.6338 | pathogenic | -1.545 | Destabilizing | 0.992 | D | 0.587 | neutral | None | None | None | None | N |
V/D | 0.617 | likely_pathogenic | 0.582 | pathogenic | -2.664 | Highly Destabilizing | 0.379 | N | 0.572 | neutral | N | 0.511651617 | None | None | N |
V/E | 0.5007 | ambiguous | 0.4801 | ambiguous | -2.465 | Highly Destabilizing | 0.617 | D | 0.528 | neutral | None | None | None | None | N |
V/F | 0.2794 | likely_benign | 0.2179 | benign | -1.181 | Destabilizing | 0.81 | D | 0.599 | neutral | N | 0.511998334 | None | None | N |
V/G | 0.336 | likely_benign | 0.2877 | benign | -2.482 | Highly Destabilizing | 0.549 | D | 0.58 | neutral | N | 0.477182136 | None | None | N |
V/H | 0.6857 | likely_pathogenic | 0.6156 | pathogenic | -2.278 | Highly Destabilizing | 0.92 | D | 0.621 | neutral | None | None | None | None | N |
V/I | 0.0897 | likely_benign | 0.0747 | benign | -0.62 | Destabilizing | 0.004 | N | 0.235 | neutral | N | 0.445311982 | None | None | N |
V/K | 0.5836 | likely_pathogenic | 0.5464 | ambiguous | -1.694 | Destabilizing | 0.617 | D | 0.533 | neutral | None | None | None | None | N |
V/L | 0.244 | likely_benign | 0.1827 | benign | -0.62 | Destabilizing | 0.08 | N | 0.38 | neutral | N | 0.483136864 | None | None | N |
V/M | 0.1622 | likely_benign | 0.124 | benign | -0.743 | Destabilizing | 0.85 | D | 0.578 | neutral | None | None | None | None | N |
V/N | 0.3162 | likely_benign | 0.253 | benign | -1.98 | Destabilizing | 0.021 | N | 0.56 | neutral | None | None | None | None | N |
V/P | 0.9609 | likely_pathogenic | 0.952 | pathogenic | -1.049 | Destabilizing | 0.92 | D | 0.597 | neutral | None | None | None | None | N |
V/Q | 0.4928 | ambiguous | 0.4354 | ambiguous | -1.85 | Destabilizing | 0.92 | D | 0.591 | neutral | None | None | None | None | N |
V/R | 0.5367 | ambiguous | 0.5104 | ambiguous | -1.492 | Destabilizing | 0.85 | D | 0.613 | neutral | None | None | None | None | N |
V/S | 0.2127 | likely_benign | 0.1796 | benign | -2.533 | Highly Destabilizing | 0.059 | N | 0.48 | neutral | None | None | None | None | N |
V/T | 0.1372 | likely_benign | 0.124 | benign | -2.208 | Highly Destabilizing | 0.002 | N | 0.242 | neutral | None | None | None | None | N |
V/W | 0.9091 | likely_pathogenic | 0.8719 | pathogenic | -1.721 | Destabilizing | 0.992 | D | 0.651 | neutral | None | None | None | None | N |
V/Y | 0.6748 | likely_pathogenic | 0.5907 | pathogenic | -1.333 | Destabilizing | 0.92 | D | 0.593 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.