Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26993 | 81202;81203;81204 | chr2:178565155;178565154;178565153 | chr2:179429882;179429881;179429880 |
N2AB | 25352 | 76279;76280;76281 | chr2:178565155;178565154;178565153 | chr2:179429882;179429881;179429880 |
N2A | 24425 | 73498;73499;73500 | chr2:178565155;178565154;178565153 | chr2:179429882;179429881;179429880 |
N2B | 17928 | 54007;54008;54009 | chr2:178565155;178565154;178565153 | chr2:179429882;179429881;179429880 |
Novex-1 | 18053 | 54382;54383;54384 | chr2:178565155;178565154;178565153 | chr2:179429882;179429881;179429880 |
Novex-2 | 18120 | 54583;54584;54585 | chr2:178565155;178565154;178565153 | chr2:179429882;179429881;179429880 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 1.0 | D | 0.807 | 0.54 | 0.48461828368 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 6.17284E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.175 | likely_benign | 0.1666 | benign | -0.798 | Destabilizing | 0.997 | D | 0.482 | neutral | N | 0.487416487 | None | None | N |
S/C | 0.1927 | likely_benign | 0.1958 | benign | -0.675 | Destabilizing | 1.0 | D | 0.824 | deleterious | N | 0.503763223 | None | None | N |
S/D | 0.8827 | likely_pathogenic | 0.8735 | pathogenic | -1.455 | Destabilizing | 0.999 | D | 0.623 | neutral | None | None | None | None | N |
S/E | 0.8668 | likely_pathogenic | 0.8553 | pathogenic | -1.285 | Destabilizing | 0.999 | D | 0.596 | neutral | None | None | None | None | N |
S/F | 0.5315 | ambiguous | 0.5182 | ambiguous | -0.692 | Destabilizing | 1.0 | D | 0.885 | deleterious | N | 0.518651474 | None | None | N |
S/G | 0.2086 | likely_benign | 0.1856 | benign | -1.17 | Destabilizing | 0.999 | D | 0.568 | neutral | None | None | None | None | N |
S/H | 0.5812 | likely_pathogenic | 0.5736 | pathogenic | -1.584 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
S/I | 0.6033 | likely_pathogenic | 0.5989 | pathogenic | 0.134 | Stabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
S/K | 0.8944 | likely_pathogenic | 0.8858 | pathogenic | -0.411 | Destabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | N |
S/L | 0.3252 | likely_benign | 0.3272 | benign | 0.134 | Stabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
S/M | 0.473 | ambiguous | 0.4549 | ambiguous | 0.028 | Stabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
S/N | 0.4906 | ambiguous | 0.4632 | ambiguous | -1.036 | Destabilizing | 0.999 | D | 0.596 | neutral | None | None | None | None | N |
S/P | 0.9882 | likely_pathogenic | 0.9855 | pathogenic | -0.142 | Destabilizing | 1.0 | D | 0.807 | deleterious | D | 0.541528669 | None | None | N |
S/Q | 0.7449 | likely_pathogenic | 0.731 | pathogenic | -0.837 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
S/R | 0.8337 | likely_pathogenic | 0.8297 | pathogenic | -0.718 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
S/T | 0.1479 | likely_benign | 0.1433 | benign | -0.703 | Destabilizing | 0.999 | D | 0.529 | neutral | D | 0.524159554 | None | None | N |
S/V | 0.5507 | ambiguous | 0.5421 | ambiguous | -0.142 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
S/W | 0.7255 | likely_pathogenic | 0.7232 | pathogenic | -0.96 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
S/Y | 0.516 | ambiguous | 0.5165 | ambiguous | -0.51 | Destabilizing | 1.0 | D | 0.891 | deleterious | N | 0.518651474 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.