Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27000 | 81223;81224;81225 | chr2:178565134;178565133;178565132 | chr2:179429861;179429860;179429859 |
N2AB | 25359 | 76300;76301;76302 | chr2:178565134;178565133;178565132 | chr2:179429861;179429860;179429859 |
N2A | 24432 | 73519;73520;73521 | chr2:178565134;178565133;178565132 | chr2:179429861;179429860;179429859 |
N2B | 17935 | 54028;54029;54030 | chr2:178565134;178565133;178565132 | chr2:179429861;179429860;179429859 |
Novex-1 | 18060 | 54403;54404;54405 | chr2:178565134;178565133;178565132 | chr2:179429861;179429860;179429859 |
Novex-2 | 18127 | 54604;54605;54606 | chr2:178565134;178565133;178565132 | chr2:179429861;179429860;179429859 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.97 | N | 0.631 | 0.332 | 0.36355261348 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1261 | likely_benign | 0.1198 | benign | -1.069 | Destabilizing | 0.489 | N | 0.561 | neutral | N | 0.517326796 | None | None | I |
T/C | 0.6476 | likely_pathogenic | 0.6158 | pathogenic | -0.67 | Destabilizing | 0.998 | D | 0.651 | neutral | None | None | None | None | I |
T/D | 0.2656 | likely_benign | 0.3028 | benign | -0.483 | Destabilizing | 0.019 | N | 0.237 | neutral | None | None | None | None | I |
T/E | 0.3948 | ambiguous | 0.3988 | ambiguous | -0.433 | Destabilizing | 0.754 | D | 0.57 | neutral | None | None | None | None | I |
T/F | 0.49 | ambiguous | 0.4676 | ambiguous | -0.994 | Destabilizing | 0.993 | D | 0.697 | prob.neutral | None | None | None | None | I |
T/G | 0.2986 | likely_benign | 0.3042 | benign | -1.377 | Destabilizing | 0.86 | D | 0.643 | neutral | None | None | None | None | I |
T/H | 0.391 | ambiguous | 0.3718 | ambiguous | -1.615 | Destabilizing | 0.998 | D | 0.685 | prob.neutral | None | None | None | None | I |
T/I | 0.4076 | ambiguous | 0.3696 | ambiguous | -0.319 | Destabilizing | 0.97 | D | 0.631 | neutral | N | 0.476852968 | None | None | I |
T/K | 0.3396 | likely_benign | 0.3502 | ambiguous | -0.775 | Destabilizing | 0.86 | D | 0.554 | neutral | None | None | None | None | I |
T/L | 0.1563 | likely_benign | 0.1434 | benign | -0.319 | Destabilizing | 0.926 | D | 0.557 | neutral | None | None | None | None | I |
T/M | 0.1499 | likely_benign | 0.1374 | benign | -0.03 | Destabilizing | 0.998 | D | 0.642 | neutral | None | None | None | None | I |
T/N | 0.123 | likely_benign | 0.1296 | benign | -0.855 | Destabilizing | 0.698 | D | 0.569 | neutral | N | 0.477904403 | None | None | I |
T/P | 0.2079 | likely_benign | 0.1835 | benign | -0.537 | Destabilizing | 0.97 | D | 0.617 | neutral | N | 0.478548034 | None | None | I |
T/Q | 0.3458 | ambiguous | 0.338 | benign | -0.958 | Destabilizing | 0.978 | D | 0.636 | neutral | None | None | None | None | I |
T/R | 0.3127 | likely_benign | 0.3282 | benign | -0.636 | Destabilizing | 0.978 | D | 0.635 | neutral | None | None | None | None | I |
T/S | 0.1155 | likely_benign | 0.1177 | benign | -1.171 | Destabilizing | 0.153 | N | 0.265 | neutral | N | 0.484963661 | None | None | I |
T/V | 0.2759 | likely_benign | 0.2548 | benign | -0.537 | Destabilizing | 0.926 | D | 0.57 | neutral | None | None | None | None | I |
T/W | 0.8028 | likely_pathogenic | 0.7818 | pathogenic | -0.918 | Destabilizing | 0.998 | D | 0.723 | prob.delet. | None | None | None | None | I |
T/Y | 0.478 | ambiguous | 0.4476 | ambiguous | -0.679 | Destabilizing | 0.993 | D | 0.695 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.