Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27004 | 81235;81236;81237 | chr2:178565122;178565121;178565120 | chr2:179429849;179429848;179429847 |
N2AB | 25363 | 76312;76313;76314 | chr2:178565122;178565121;178565120 | chr2:179429849;179429848;179429847 |
N2A | 24436 | 73531;73532;73533 | chr2:178565122;178565121;178565120 | chr2:179429849;179429848;179429847 |
N2B | 17939 | 54040;54041;54042 | chr2:178565122;178565121;178565120 | chr2:179429849;179429848;179429847 |
Novex-1 | 18064 | 54415;54416;54417 | chr2:178565122;178565121;178565120 | chr2:179429849;179429848;179429847 |
Novex-2 | 18131 | 54616;54617;54618 | chr2:178565122;178565121;178565120 | chr2:179429849;179429848;179429847 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | None | None | 0.015 | N | 0.283 | 0.178 | 0.0884992946249 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1856 | likely_benign | 0.1755 | benign | -0.118 | Destabilizing | 0.742 | D | 0.508 | neutral | None | None | None | None | I |
Q/C | 0.7933 | likely_pathogenic | 0.7715 | pathogenic | 0.139 | Stabilizing | 0.996 | D | 0.563 | neutral | None | None | None | None | I |
Q/D | 0.5466 | ambiguous | 0.5445 | ambiguous | -0.034 | Destabilizing | 0.742 | D | 0.5 | neutral | None | None | None | None | I |
Q/E | 0.1543 | likely_benign | 0.164 | benign | -0.086 | Destabilizing | 0.472 | N | 0.475 | neutral | N | 0.42479785 | None | None | I |
Q/F | 0.802 | likely_pathogenic | 0.774 | pathogenic | -0.475 | Destabilizing | 0.953 | D | 0.547 | neutral | None | None | None | None | I |
Q/G | 0.3934 | ambiguous | 0.3731 | ambiguous | -0.249 | Destabilizing | 0.742 | D | 0.559 | neutral | None | None | None | None | I |
Q/H | 0.303 | likely_benign | 0.2656 | benign | -0.126 | Destabilizing | 0.015 | N | 0.283 | neutral | N | 0.520135027 | None | None | I |
Q/I | 0.4305 | ambiguous | 0.4159 | ambiguous | 0.13 | Stabilizing | 0.953 | D | 0.561 | neutral | None | None | None | None | I |
Q/K | 0.2599 | likely_benign | 0.2751 | benign | 0.117 | Stabilizing | 0.684 | D | 0.515 | neutral | N | 0.467839338 | None | None | I |
Q/L | 0.185 | likely_benign | 0.1745 | benign | 0.13 | Stabilizing | 0.684 | D | 0.547 | neutral | N | 0.511496901 | None | None | I |
Q/M | 0.3656 | ambiguous | 0.36 | ambiguous | 0.292 | Stabilizing | 0.984 | D | 0.464 | neutral | None | None | None | None | I |
Q/N | 0.2845 | likely_benign | 0.2634 | benign | -0.113 | Destabilizing | 0.742 | D | 0.477 | neutral | None | None | None | None | I |
Q/P | 0.0887 | likely_benign | 0.0874 | benign | 0.072 | Stabilizing | 0.007 | N | 0.242 | neutral | N | 0.381719076 | None | None | I |
Q/R | 0.2746 | likely_benign | 0.2882 | benign | 0.29 | Stabilizing | 0.684 | D | 0.529 | neutral | N | 0.488620042 | None | None | I |
Q/S | 0.1945 | likely_benign | 0.1881 | benign | -0.11 | Destabilizing | 0.742 | D | 0.509 | neutral | None | None | None | None | I |
Q/T | 0.1987 | likely_benign | 0.1963 | benign | -0.028 | Destabilizing | 0.742 | D | 0.526 | neutral | None | None | None | None | I |
Q/V | 0.2517 | likely_benign | 0.2479 | benign | 0.072 | Stabilizing | 0.953 | D | 0.509 | neutral | None | None | None | None | I |
Q/W | 0.8109 | likely_pathogenic | 0.8066 | pathogenic | -0.512 | Destabilizing | 0.996 | D | 0.594 | neutral | None | None | None | None | I |
Q/Y | 0.644 | likely_pathogenic | 0.6191 | pathogenic | -0.228 | Destabilizing | 0.91 | D | 0.531 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.