Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27005 | 81238;81239;81240 | chr2:178565119;178565118;178565117 | chr2:179429846;179429845;179429844 |
N2AB | 25364 | 76315;76316;76317 | chr2:178565119;178565118;178565117 | chr2:179429846;179429845;179429844 |
N2A | 24437 | 73534;73535;73536 | chr2:178565119;178565118;178565117 | chr2:179429846;179429845;179429844 |
N2B | 17940 | 54043;54044;54045 | chr2:178565119;178565118;178565117 | chr2:179429846;179429845;179429844 |
Novex-1 | 18065 | 54418;54419;54420 | chr2:178565119;178565118;178565117 | chr2:179429846;179429845;179429844 |
Novex-2 | 18132 | 54619;54620;54621 | chr2:178565119;178565118;178565117 | chr2:179429846;179429845;179429844 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/K | rs1430969967 | -1.744 | 0.983 | D | 0.842 | 0.666 | 0.87933222287 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.65E-05 | 0 | 0 |
I/T | rs1430969967 | -2.12 | 0.892 | D | 0.794 | 0.61 | 0.749266289315 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
I/T | rs1430969967 | -2.12 | 0.892 | D | 0.794 | 0.61 | 0.749266289315 | gnomAD-4.0.0 | 2.05299E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69879E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9729 | likely_pathogenic | 0.9758 | pathogenic | -2.364 | Highly Destabilizing | 0.845 | D | 0.665 | neutral | None | None | None | None | I |
I/C | 0.9835 | likely_pathogenic | 0.9841 | pathogenic | -1.386 | Destabilizing | 0.999 | D | 0.746 | deleterious | None | None | None | None | I |
I/D | 0.9985 | likely_pathogenic | 0.9988 | pathogenic | -2.38 | Highly Destabilizing | 0.996 | D | 0.85 | deleterious | None | None | None | None | I |
I/E | 0.9951 | likely_pathogenic | 0.996 | pathogenic | -2.327 | Highly Destabilizing | 0.987 | D | 0.844 | deleterious | None | None | None | None | I |
I/F | 0.9099 | likely_pathogenic | 0.9218 | pathogenic | -1.744 | Destabilizing | 0.975 | D | 0.755 | deleterious | None | None | None | None | I |
I/G | 0.9955 | likely_pathogenic | 0.9962 | pathogenic | -2.76 | Highly Destabilizing | 0.987 | D | 0.843 | deleterious | None | None | None | None | I |
I/H | 0.9964 | likely_pathogenic | 0.9969 | pathogenic | -2.061 | Highly Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | I |
I/K | 0.9902 | likely_pathogenic | 0.9924 | pathogenic | -1.719 | Destabilizing | 0.983 | D | 0.842 | deleterious | D | 0.540923239 | None | None | I |
I/L | 0.4482 | ambiguous | 0.4757 | ambiguous | -1.291 | Destabilizing | 0.426 | N | 0.443 | neutral | N | 0.474983771 | None | None | I |
I/M | 0.6051 | likely_pathogenic | 0.5769 | pathogenic | -0.855 | Destabilizing | 0.983 | D | 0.72 | prob.delet. | D | 0.52476754 | None | None | I |
I/N | 0.9659 | likely_pathogenic | 0.97 | pathogenic | -1.61 | Destabilizing | 0.996 | D | 0.846 | deleterious | None | None | None | None | I |
I/P | 0.9516 | likely_pathogenic | 0.9631 | pathogenic | -1.623 | Destabilizing | 0.996 | D | 0.849 | deleterious | None | None | None | None | I |
I/Q | 0.993 | likely_pathogenic | 0.9939 | pathogenic | -1.764 | Destabilizing | 0.996 | D | 0.843 | deleterious | None | None | None | None | I |
I/R | 0.9886 | likely_pathogenic | 0.9911 | pathogenic | -1.083 | Destabilizing | 0.983 | D | 0.847 | deleterious | D | 0.525781498 | None | None | I |
I/S | 0.9793 | likely_pathogenic | 0.9828 | pathogenic | -2.205 | Highly Destabilizing | 0.987 | D | 0.818 | deleterious | None | None | None | None | I |
I/T | 0.9397 | likely_pathogenic | 0.9551 | pathogenic | -2.035 | Highly Destabilizing | 0.892 | D | 0.794 | deleterious | D | 0.54016277 | None | None | I |
I/V | 0.1325 | likely_benign | 0.1424 | benign | -1.623 | Destabilizing | 0.011 | N | 0.266 | neutral | N | 0.491817849 | None | None | I |
I/W | 0.9984 | likely_pathogenic | 0.9984 | pathogenic | -1.944 | Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | I |
I/Y | 0.9873 | likely_pathogenic | 0.9889 | pathogenic | -1.743 | Destabilizing | 0.987 | D | 0.8 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.