Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27011 | 81256;81257;81258 | chr2:178565101;178565100;178565099 | chr2:179429828;179429827;179429826 |
N2AB | 25370 | 76333;76334;76335 | chr2:178565101;178565100;178565099 | chr2:179429828;179429827;179429826 |
N2A | 24443 | 73552;73553;73554 | chr2:178565101;178565100;178565099 | chr2:179429828;179429827;179429826 |
N2B | 17946 | 54061;54062;54063 | chr2:178565101;178565100;178565099 | chr2:179429828;179429827;179429826 |
Novex-1 | 18071 | 54436;54437;54438 | chr2:178565101;178565100;178565099 | chr2:179429828;179429827;179429826 |
Novex-2 | 18138 | 54637;54638;54639 | chr2:178565101;178565100;178565099 | chr2:179429828;179429827;179429826 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs765653425 | -1.868 | 0.996 | N | 0.638 | 0.329 | 0.28492961333 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
E/D | rs765653425 | -1.868 | 0.996 | N | 0.638 | 0.329 | 0.28492961333 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 3.16456E-03 | 1.47E-05 | 0 | 0 |
E/D | rs765653425 | -1.868 | 0.996 | N | 0.638 | 0.329 | 0.28492961333 | gnomAD-4.0.0 | 6.84294E-07 | None | None | None | None | N | None | 2.98918E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4879 | ambiguous | 0.4566 | ambiguous | -0.701 | Destabilizing | 0.996 | D | 0.667 | neutral | D | 0.5323935 | None | None | N |
E/C | 0.9124 | likely_pathogenic | 0.9143 | pathogenic | -0.028 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
E/D | 0.6927 | likely_pathogenic | 0.6721 | pathogenic | -1.572 | Destabilizing | 0.996 | D | 0.638 | neutral | N | 0.471586275 | None | None | N |
E/F | 0.9236 | likely_pathogenic | 0.937 | pathogenic | -0.461 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
E/G | 0.6233 | likely_pathogenic | 0.6116 | pathogenic | -1.093 | Destabilizing | 0.999 | D | 0.763 | deleterious | D | 0.522647037 | None | None | N |
E/H | 0.7956 | likely_pathogenic | 0.8407 | pathogenic | -0.379 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
E/I | 0.8288 | likely_pathogenic | 0.8133 | pathogenic | 0.415 | Stabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
E/K | 0.6734 | likely_pathogenic | 0.6839 | pathogenic | -0.735 | Destabilizing | 0.992 | D | 0.653 | neutral | N | 0.519605163 | None | None | N |
E/L | 0.6662 | likely_pathogenic | 0.6714 | pathogenic | 0.415 | Stabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
E/M | 0.6589 | likely_pathogenic | 0.6369 | pathogenic | 0.977 | Stabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
E/N | 0.8158 | likely_pathogenic | 0.8043 | pathogenic | -1.093 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
E/P | 0.9988 | likely_pathogenic | 0.9991 | pathogenic | 0.059 | Stabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
E/Q | 0.2272 | likely_benign | 0.2097 | benign | -0.746 | Destabilizing | 0.957 | D | 0.395 | neutral | N | 0.508725955 | None | None | N |
E/R | 0.8113 | likely_pathogenic | 0.8251 | pathogenic | -0.776 | Destabilizing | 0.999 | D | 0.808 | deleterious | None | None | None | None | N |
E/S | 0.5903 | likely_pathogenic | 0.5602 | ambiguous | -1.595 | Destabilizing | 0.997 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/T | 0.7756 | likely_pathogenic | 0.7432 | pathogenic | -1.213 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
E/V | 0.6536 | likely_pathogenic | 0.6246 | pathogenic | 0.059 | Stabilizing | 0.999 | D | 0.787 | deleterious | N | 0.518012228 | None | None | N |
E/W | 0.9773 | likely_pathogenic | 0.9837 | pathogenic | -0.698 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
E/Y | 0.8865 | likely_pathogenic | 0.9069 | pathogenic | -0.284 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.