Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27018 | 81277;81278;81279 | chr2:178565080;178565079;178565078 | chr2:179429807;179429806;179429805 |
N2AB | 25377 | 76354;76355;76356 | chr2:178565080;178565079;178565078 | chr2:179429807;179429806;179429805 |
N2A | 24450 | 73573;73574;73575 | chr2:178565080;178565079;178565078 | chr2:179429807;179429806;179429805 |
N2B | 17953 | 54082;54083;54084 | chr2:178565080;178565079;178565078 | chr2:179429807;179429806;179429805 |
Novex-1 | 18078 | 54457;54458;54459 | chr2:178565080;178565079;178565078 | chr2:179429807;179429806;179429805 |
Novex-2 | 18145 | 54658;54659;54660 | chr2:178565080;178565079;178565078 | chr2:179429807;179429806;179429805 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | None | None | 0.958 | N | 0.425 | 0.265 | 0.185906805712 | gnomAD-4.0.0 | 1.59162E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85917E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1213 | likely_benign | 0.1085 | benign | -0.322 | Destabilizing | 0.825 | D | 0.445 | neutral | N | 0.491852348 | None | None | N |
T/C | 0.8127 | likely_pathogenic | 0.7752 | pathogenic | -0.301 | Destabilizing | 1.0 | D | 0.548 | neutral | None | None | None | None | N |
T/D | 0.785 | likely_pathogenic | 0.7862 | pathogenic | 0.164 | Stabilizing | 0.991 | D | 0.485 | neutral | None | None | None | None | N |
T/E | 0.7115 | likely_pathogenic | 0.7156 | pathogenic | 0.081 | Stabilizing | 0.995 | D | 0.491 | neutral | None | None | None | None | N |
T/F | 0.7378 | likely_pathogenic | 0.7261 | pathogenic | -0.926 | Destabilizing | 0.998 | D | 0.547 | neutral | None | None | None | None | N |
T/G | 0.4323 | ambiguous | 0.3857 | ambiguous | -0.416 | Destabilizing | 0.086 | N | 0.361 | neutral | None | None | None | None | N |
T/H | 0.7184 | likely_pathogenic | 0.6821 | pathogenic | -0.619 | Destabilizing | 1.0 | D | 0.555 | neutral | None | None | None | None | N |
T/I | 0.4836 | ambiguous | 0.5157 | ambiguous | -0.197 | Destabilizing | 0.998 | D | 0.496 | neutral | N | 0.476737609 | None | None | N |
T/K | 0.6018 | likely_pathogenic | 0.5891 | pathogenic | -0.296 | Destabilizing | 0.991 | D | 0.497 | neutral | None | None | None | None | N |
T/L | 0.2276 | likely_benign | 0.2263 | benign | -0.197 | Destabilizing | 0.984 | D | 0.446 | neutral | None | None | None | None | N |
T/M | 0.1738 | likely_benign | 0.1607 | benign | -0.132 | Destabilizing | 1.0 | D | 0.541 | neutral | None | None | None | None | N |
T/N | 0.3192 | likely_benign | 0.3054 | benign | -0.09 | Destabilizing | 0.988 | D | 0.49 | neutral | N | 0.489657405 | None | None | N |
T/P | 0.289 | likely_benign | 0.2718 | benign | -0.213 | Destabilizing | 0.998 | D | 0.494 | neutral | N | 0.516556004 | None | None | N |
T/Q | 0.5387 | ambiguous | 0.4938 | ambiguous | -0.295 | Destabilizing | 0.998 | D | 0.525 | neutral | None | None | None | None | N |
T/R | 0.5734 | likely_pathogenic | 0.5653 | pathogenic | -0.006 | Destabilizing | 0.995 | D | 0.502 | neutral | None | None | None | None | N |
T/S | 0.2218 | likely_benign | 0.2007 | benign | -0.284 | Destabilizing | 0.958 | D | 0.425 | neutral | N | 0.454699469 | None | None | N |
T/V | 0.278 | likely_benign | 0.2827 | benign | -0.213 | Destabilizing | 0.984 | D | 0.425 | neutral | None | None | None | None | N |
T/W | 0.9492 | likely_pathogenic | 0.9501 | pathogenic | -0.973 | Destabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | N |
T/Y | 0.7763 | likely_pathogenic | 0.768 | pathogenic | -0.667 | Destabilizing | 0.998 | D | 0.553 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.