Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2702 | 8329;8330;8331 | chr2:178771223;178771222;178771221 | chr2:179635950;179635949;179635948 |
N2AB | 2702 | 8329;8330;8331 | chr2:178771223;178771222;178771221 | chr2:179635950;179635949;179635948 |
N2A | 2702 | 8329;8330;8331 | chr2:178771223;178771222;178771221 | chr2:179635950;179635949;179635948 |
N2B | 2656 | 8191;8192;8193 | chr2:178771223;178771222;178771221 | chr2:179635950;179635949;179635948 |
Novex-1 | 2656 | 8191;8192;8193 | chr2:178771223;178771222;178771221 | chr2:179635950;179635949;179635948 |
Novex-2 | 2656 | 8191;8192;8193 | chr2:178771223;178771222;178771221 | chr2:179635950;179635949;179635948 |
Novex-3 | 2702 | 8329;8330;8331 | chr2:178771223;178771222;178771221 | chr2:179635950;179635949;179635948 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 1.0 | N | 0.741 | 0.396 | 0.397391247328 | gnomAD-4.0.0 | 6.84113E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9931E-07 | 0 | 0 |
L/V | None | None | 0.999 | N | 0.531 | 0.369 | 0.336155897331 | gnomAD-4.0.0 | 6.84113E-07 | None | None | None | None | N | None | 0 | 0 | None | 3.82614E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9608 | likely_pathogenic | 0.9577 | pathogenic | -2.722 | Highly Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | N |
L/C | 0.9435 | likely_pathogenic | 0.9418 | pathogenic | -1.847 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
L/D | 0.9994 | likely_pathogenic | 0.9993 | pathogenic | -3.289 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
L/E | 0.9945 | likely_pathogenic | 0.9943 | pathogenic | -3.0 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
L/F | 0.8407 | likely_pathogenic | 0.8065 | pathogenic | -1.624 | Destabilizing | 1.0 | D | 0.741 | deleterious | N | 0.500602417 | None | None | N |
L/G | 0.9883 | likely_pathogenic | 0.9874 | pathogenic | -3.317 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
L/H | 0.9929 | likely_pathogenic | 0.991 | pathogenic | -2.897 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.562220334 | None | None | N |
L/I | 0.2861 | likely_benign | 0.2935 | benign | -0.955 | Destabilizing | 0.999 | D | 0.553 | neutral | N | 0.447949257 | None | None | N |
L/K | 0.9921 | likely_pathogenic | 0.9911 | pathogenic | -2.064 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
L/M | 0.4321 | ambiguous | 0.3878 | ambiguous | -0.946 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
L/N | 0.9951 | likely_pathogenic | 0.9949 | pathogenic | -2.619 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
L/P | 0.9971 | likely_pathogenic | 0.9971 | pathogenic | -1.531 | Destabilizing | 1.0 | D | 0.877 | deleterious | D | 0.562220334 | None | None | N |
L/Q | 0.9819 | likely_pathogenic | 0.9786 | pathogenic | -2.362 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
L/R | 0.9826 | likely_pathogenic | 0.9803 | pathogenic | -1.937 | Destabilizing | 1.0 | D | 0.889 | deleterious | D | 0.561800443 | None | None | N |
L/S | 0.9947 | likely_pathogenic | 0.9941 | pathogenic | -3.261 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
L/T | 0.9747 | likely_pathogenic | 0.9706 | pathogenic | -2.816 | Highly Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
L/V | 0.3573 | ambiguous | 0.3503 | ambiguous | -1.531 | Destabilizing | 0.999 | D | 0.531 | neutral | N | 0.338924472 | None | None | N |
L/W | 0.9786 | likely_pathogenic | 0.9726 | pathogenic | -2.095 | Highly Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
L/Y | 0.9796 | likely_pathogenic | 0.9754 | pathogenic | -1.811 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.