Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27025 | 81298;81299;81300 | chr2:178565059;178565058;178565057 | chr2:179429786;179429785;179429784 |
N2AB | 25384 | 76375;76376;76377 | chr2:178565059;178565058;178565057 | chr2:179429786;179429785;179429784 |
N2A | 24457 | 73594;73595;73596 | chr2:178565059;178565058;178565057 | chr2:179429786;179429785;179429784 |
N2B | 17960 | 54103;54104;54105 | chr2:178565059;178565058;178565057 | chr2:179429786;179429785;179429784 |
Novex-1 | 18085 | 54478;54479;54480 | chr2:178565059;178565058;178565057 | chr2:179429786;179429785;179429784 |
Novex-2 | 18152 | 54679;54680;54681 | chr2:178565059;178565058;178565057 | chr2:179429786;179429785;179429784 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 1.0 | N | 0.779 | 0.384 | 0.372087925617 | gnomAD-4.0.0 | 1.59158E-06 | None | None | None | None | I | None | 0 | 0 | None | 4.76781E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6605 | likely_pathogenic | 0.679 | pathogenic | -0.826 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
A/D | 0.8255 | likely_pathogenic | 0.8327 | pathogenic | -0.964 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
A/E | 0.7162 | likely_pathogenic | 0.7443 | pathogenic | -1.091 | Destabilizing | 1.0 | D | 0.779 | deleterious | N | 0.458971925 | None | None | I |
A/F | 0.7163 | likely_pathogenic | 0.7551 | pathogenic | -1.169 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
A/G | 0.2098 | likely_benign | 0.2155 | benign | -0.814 | Destabilizing | 1.0 | D | 0.543 | neutral | N | 0.458761281 | None | None | I |
A/H | 0.8095 | likely_pathogenic | 0.822 | pathogenic | -0.88 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
A/I | 0.6117 | likely_pathogenic | 0.6488 | pathogenic | -0.521 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | I |
A/K | 0.8427 | likely_pathogenic | 0.8688 | pathogenic | -0.976 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | I |
A/L | 0.3675 | ambiguous | 0.4185 | ambiguous | -0.521 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
A/M | 0.4059 | ambiguous | 0.4467 | ambiguous | -0.329 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
A/N | 0.5004 | ambiguous | 0.5144 | ambiguous | -0.617 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | I |
A/P | 0.5425 | ambiguous | 0.5228 | ambiguous | -0.538 | Destabilizing | 1.0 | D | 0.779 | deleterious | N | 0.519001664 | None | None | I |
A/Q | 0.5735 | likely_pathogenic | 0.6079 | pathogenic | -0.925 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
A/R | 0.7914 | likely_pathogenic | 0.8295 | pathogenic | -0.467 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
A/S | 0.1192 | likely_benign | 0.1143 | benign | -0.866 | Destabilizing | 1.0 | D | 0.523 | neutral | N | 0.424032632 | None | None | I |
A/T | 0.1524 | likely_benign | 0.1603 | benign | -0.916 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | N | 0.460684079 | None | None | I |
A/V | 0.313 | likely_benign | 0.341 | ambiguous | -0.538 | Destabilizing | 1.0 | D | 0.631 | neutral | N | 0.498735461 | None | None | I |
A/W | 0.9453 | likely_pathogenic | 0.9602 | pathogenic | -1.341 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
A/Y | 0.8049 | likely_pathogenic | 0.8344 | pathogenic | -0.992 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.