Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27027 | 81304;81305;81306 | chr2:178565053;178565052;178565051 | chr2:179429780;179429779;179429778 |
N2AB | 25386 | 76381;76382;76383 | chr2:178565053;178565052;178565051 | chr2:179429780;179429779;179429778 |
N2A | 24459 | 73600;73601;73602 | chr2:178565053;178565052;178565051 | chr2:179429780;179429779;179429778 |
N2B | 17962 | 54109;54110;54111 | chr2:178565053;178565052;178565051 | chr2:179429780;179429779;179429778 |
Novex-1 | 18087 | 54484;54485;54486 | chr2:178565053;178565052;178565051 | chr2:179429780;179429779;179429778 |
Novex-2 | 18154 | 54685;54686;54687 | chr2:178565053;178565052;178565051 | chr2:179429780;179429779;179429778 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs749171660 | -1.875 | 0.489 | N | 0.534 | 0.34 | 0.506311303838 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
V/A | rs749171660 | -1.875 | 0.489 | N | 0.534 | 0.34 | 0.506311303838 | gnomAD-4.0.0 | 4.10565E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99543E-07 | 5.79872E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6465 | likely_pathogenic | 0.6267 | pathogenic | -1.733 | Destabilizing | 0.489 | N | 0.534 | neutral | N | 0.462793502 | None | None | N |
V/C | 0.9531 | likely_pathogenic | 0.9403 | pathogenic | -1.439 | Destabilizing | 0.998 | D | 0.667 | neutral | None | None | None | None | N |
V/D | 0.9935 | likely_pathogenic | 0.9931 | pathogenic | -1.657 | Destabilizing | 0.942 | D | 0.735 | prob.delet. | N | 0.474772145 | None | None | N |
V/E | 0.9737 | likely_pathogenic | 0.9757 | pathogenic | -1.527 | Destabilizing | 0.956 | D | 0.697 | prob.neutral | None | None | None | None | N |
V/F | 0.8852 | likely_pathogenic | 0.8805 | pathogenic | -1.122 | Destabilizing | 0.97 | D | 0.697 | prob.neutral | N | 0.47859726 | None | None | N |
V/G | 0.9162 | likely_pathogenic | 0.9124 | pathogenic | -2.189 | Highly Destabilizing | 0.698 | D | 0.724 | prob.delet. | N | 0.474933048 | None | None | N |
V/H | 0.9929 | likely_pathogenic | 0.9923 | pathogenic | -1.805 | Destabilizing | 0.998 | D | 0.754 | deleterious | None | None | None | None | N |
V/I | 0.1155 | likely_benign | 0.0974 | benign | -0.522 | Destabilizing | 0.025 | N | 0.161 | neutral | N | 0.481904713 | None | None | N |
V/K | 0.9846 | likely_pathogenic | 0.9851 | pathogenic | -1.358 | Destabilizing | 0.956 | D | 0.699 | prob.neutral | None | None | None | None | N |
V/L | 0.7069 | likely_pathogenic | 0.6228 | pathogenic | -0.522 | Destabilizing | 0.489 | N | 0.428 | neutral | N | 0.487329176 | None | None | N |
V/M | 0.5748 | likely_pathogenic | 0.5187 | ambiguous | -0.599 | Destabilizing | 0.978 | D | 0.659 | neutral | None | None | None | None | N |
V/N | 0.9563 | likely_pathogenic | 0.9493 | pathogenic | -1.444 | Destabilizing | 0.956 | D | 0.761 | deleterious | None | None | None | None | N |
V/P | 0.9894 | likely_pathogenic | 0.9868 | pathogenic | -0.893 | Destabilizing | 0.978 | D | 0.722 | prob.delet. | None | None | None | None | N |
V/Q | 0.9637 | likely_pathogenic | 0.9651 | pathogenic | -1.417 | Destabilizing | 0.956 | D | 0.713 | prob.delet. | None | None | None | None | N |
V/R | 0.975 | likely_pathogenic | 0.9772 | pathogenic | -1.091 | Destabilizing | 0.956 | D | 0.771 | deleterious | None | None | None | None | N |
V/S | 0.8512 | likely_pathogenic | 0.8356 | pathogenic | -2.117 | Highly Destabilizing | 0.076 | N | 0.506 | neutral | None | None | None | None | N |
V/T | 0.6422 | likely_pathogenic | 0.6403 | pathogenic | -1.848 | Destabilizing | 0.754 | D | 0.605 | neutral | None | None | None | None | N |
V/W | 0.9981 | likely_pathogenic | 0.9978 | pathogenic | -1.459 | Destabilizing | 0.998 | D | 0.757 | deleterious | None | None | None | None | N |
V/Y | 0.9891 | likely_pathogenic | 0.9874 | pathogenic | -1.086 | Destabilizing | 0.993 | D | 0.701 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.