Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27034 | 81325;81326;81327 | chr2:178565032;178565031;178565030 | chr2:179429759;179429758;179429757 |
N2AB | 25393 | 76402;76403;76404 | chr2:178565032;178565031;178565030 | chr2:179429759;179429758;179429757 |
N2A | 24466 | 73621;73622;73623 | chr2:178565032;178565031;178565030 | chr2:179429759;179429758;179429757 |
N2B | 17969 | 54130;54131;54132 | chr2:178565032;178565031;178565030 | chr2:179429759;179429758;179429757 |
Novex-1 | 18094 | 54505;54506;54507 | chr2:178565032;178565031;178565030 | chr2:179429759;179429758;179429757 |
Novex-2 | 18161 | 54706;54707;54708 | chr2:178565032;178565031;178565030 | chr2:179429759;179429758;179429757 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.171 | N | 0.659 | 0.183 | 0.389596023526 | gnomAD-4.0.0 | 1.592E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85915E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5433 | ambiguous | 0.5003 | ambiguous | -2.482 | Highly Destabilizing | None | N | 0.491 | neutral | None | None | None | None | N |
I/C | 0.7314 | likely_pathogenic | 0.7257 | pathogenic | -1.798 | Destabilizing | 0.356 | N | 0.777 | deleterious | None | None | None | None | N |
I/D | 0.9885 | likely_pathogenic | 0.9901 | pathogenic | -3.236 | Highly Destabilizing | 0.356 | N | 0.801 | deleterious | None | None | None | None | N |
I/E | 0.9773 | likely_pathogenic | 0.9808 | pathogenic | -2.948 | Highly Destabilizing | 0.072 | N | 0.773 | deleterious | None | None | None | None | N |
I/F | 0.4319 | ambiguous | 0.3936 | ambiguous | -1.557 | Destabilizing | 0.214 | N | 0.705 | prob.neutral | None | None | None | None | N |
I/G | 0.9357 | likely_pathogenic | 0.924 | pathogenic | -3.051 | Highly Destabilizing | 0.038 | N | 0.755 | deleterious | None | None | None | None | N |
I/H | 0.9687 | likely_pathogenic | 0.9715 | pathogenic | -2.633 | Highly Destabilizing | 0.864 | D | 0.821 | deleterious | None | None | None | None | N |
I/K | 0.9768 | likely_pathogenic | 0.9818 | pathogenic | -2.215 | Highly Destabilizing | 0.055 | N | 0.773 | deleterious | N | 0.517001951 | None | None | N |
I/L | 0.2274 | likely_benign | 0.2093 | benign | -0.802 | Destabilizing | 0.002 | N | 0.416 | neutral | N | 0.472511652 | None | None | N |
I/M | 0.1669 | likely_benign | 0.1642 | benign | -0.756 | Destabilizing | 0.171 | N | 0.659 | neutral | N | 0.505138667 | None | None | N |
I/N | 0.8347 | likely_pathogenic | 0.8669 | pathogenic | -2.842 | Highly Destabilizing | 0.356 | N | 0.82 | deleterious | None | None | None | None | N |
I/P | 0.9794 | likely_pathogenic | 0.9789 | pathogenic | -1.348 | Destabilizing | 0.356 | N | 0.803 | deleterious | None | None | None | None | N |
I/Q | 0.9642 | likely_pathogenic | 0.9651 | pathogenic | -2.566 | Highly Destabilizing | 0.356 | N | 0.825 | deleterious | None | None | None | None | N |
I/R | 0.9642 | likely_pathogenic | 0.9699 | pathogenic | -2.12 | Highly Destabilizing | 0.295 | N | 0.82 | deleterious | N | 0.498897696 | None | None | N |
I/S | 0.7498 | likely_pathogenic | 0.7546 | pathogenic | -3.422 | Highly Destabilizing | 0.038 | N | 0.728 | prob.delet. | None | None | None | None | N |
I/T | 0.6744 | likely_pathogenic | 0.6559 | pathogenic | -2.971 | Highly Destabilizing | 0.012 | N | 0.671 | neutral | N | 0.484654555 | None | None | N |
I/V | 0.075 | likely_benign | 0.0664 | benign | -1.348 | Destabilizing | None | N | 0.187 | neutral | N | 0.386740894 | None | None | N |
I/W | 0.9788 | likely_pathogenic | 0.9771 | pathogenic | -1.983 | Destabilizing | 0.864 | D | 0.811 | deleterious | None | None | None | None | N |
I/Y | 0.8858 | likely_pathogenic | 0.882 | pathogenic | -1.664 | Destabilizing | 0.356 | N | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.