Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27036 | 81331;81332;81333 | chr2:178565026;178565025;178565024 | chr2:179429753;179429752;179429751 |
N2AB | 25395 | 76408;76409;76410 | chr2:178565026;178565025;178565024 | chr2:179429753;179429752;179429751 |
N2A | 24468 | 73627;73628;73629 | chr2:178565026;178565025;178565024 | chr2:179429753;179429752;179429751 |
N2B | 17971 | 54136;54137;54138 | chr2:178565026;178565025;178565024 | chr2:179429753;179429752;179429751 |
Novex-1 | 18096 | 54511;54512;54513 | chr2:178565026;178565025;178565024 | chr2:179429753;179429752;179429751 |
Novex-2 | 18163 | 54712;54713;54714 | chr2:178565026;178565025;178565024 | chr2:179429753;179429752;179429751 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs545554093 | 0.111 | 0.822 | N | 0.484 | 0.256 | 0.269558022972 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
K/E | rs545554093 | 0.111 | 0.822 | N | 0.484 | 0.256 | 0.269558022972 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93723E-04 | None | 0 | 0 | 0 | 0 | 0 |
K/E | rs545554093 | 0.111 | 0.822 | N | 0.484 | 0.256 | 0.269558022972 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 1E-03 | 0 | None | None | None | 0 | None |
K/E | rs545554093 | 0.111 | 0.822 | N | 0.484 | 0.256 | 0.269558022972 | gnomAD-4.0.0 | 2.0297E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.2779E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5662 | likely_pathogenic | 0.5754 | pathogenic | 0.049 | Stabilizing | 0.86 | D | 0.516 | neutral | None | None | None | None | N |
K/C | 0.7709 | likely_pathogenic | 0.7552 | pathogenic | -0.313 | Destabilizing | 0.998 | D | 0.649 | neutral | None | None | None | None | N |
K/D | 0.7459 | likely_pathogenic | 0.7546 | pathogenic | -0.186 | Destabilizing | 0.754 | D | 0.517 | neutral | None | None | None | None | N |
K/E | 0.5548 | ambiguous | 0.5754 | pathogenic | -0.191 | Destabilizing | 0.822 | D | 0.484 | neutral | N | 0.507875019 | None | None | N |
K/F | 0.9395 | likely_pathogenic | 0.9355 | pathogenic | -0.227 | Destabilizing | 0.978 | D | 0.613 | neutral | None | None | None | None | N |
K/G | 0.4572 | ambiguous | 0.5004 | ambiguous | -0.107 | Destabilizing | 0.86 | D | 0.515 | neutral | None | None | None | None | N |
K/H | 0.31 | likely_benign | 0.2852 | benign | -0.231 | Destabilizing | 0.043 | N | 0.505 | neutral | None | None | None | None | N |
K/I | 0.83 | likely_pathogenic | 0.8266 | pathogenic | 0.379 | Stabilizing | 0.97 | D | 0.602 | neutral | N | 0.500990248 | None | None | N |
K/L | 0.7155 | likely_pathogenic | 0.7009 | pathogenic | 0.379 | Stabilizing | 0.86 | D | 0.519 | neutral | None | None | None | None | N |
K/M | 0.6141 | likely_pathogenic | 0.6155 | pathogenic | 0.028 | Stabilizing | 0.998 | D | 0.525 | neutral | None | None | None | None | N |
K/N | 0.5222 | ambiguous | 0.5376 | ambiguous | 0.136 | Stabilizing | 0.058 | N | 0.312 | neutral | N | 0.409305535 | None | None | N |
K/P | 0.8502 | likely_pathogenic | 0.8546 | pathogenic | 0.294 | Stabilizing | 0.993 | D | 0.527 | neutral | None | None | None | None | N |
K/Q | 0.2537 | likely_benign | 0.2475 | benign | -0.018 | Destabilizing | 0.942 | D | 0.531 | neutral | N | 0.473224755 | None | None | N |
K/R | 0.0784 | likely_benign | 0.0775 | benign | -0.022 | Destabilizing | 0.014 | N | 0.266 | neutral | N | 0.437919076 | None | None | N |
K/S | 0.5739 | likely_pathogenic | 0.5859 | pathogenic | -0.257 | Destabilizing | 0.86 | D | 0.475 | neutral | None | None | None | None | N |
K/T | 0.4688 | ambiguous | 0.4725 | ambiguous | -0.135 | Destabilizing | 0.822 | D | 0.515 | neutral | N | 0.482036619 | None | None | N |
K/V | 0.7454 | likely_pathogenic | 0.7344 | pathogenic | 0.294 | Stabilizing | 0.978 | D | 0.538 | neutral | None | None | None | None | N |
K/W | 0.8949 | likely_pathogenic | 0.8891 | pathogenic | -0.308 | Destabilizing | 0.998 | D | 0.689 | prob.neutral | None | None | None | None | N |
K/Y | 0.7845 | likely_pathogenic | 0.7755 | pathogenic | 0.046 | Stabilizing | 0.915 | D | 0.571 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.