Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27038 | 81337;81338;81339 | chr2:178565020;178565019;178565018 | chr2:179429747;179429746;179429745 |
N2AB | 25397 | 76414;76415;76416 | chr2:178565020;178565019;178565018 | chr2:179429747;179429746;179429745 |
N2A | 24470 | 73633;73634;73635 | chr2:178565020;178565019;178565018 | chr2:179429747;179429746;179429745 |
N2B | 17973 | 54142;54143;54144 | chr2:178565020;178565019;178565018 | chr2:179429747;179429746;179429745 |
Novex-1 | 18098 | 54517;54518;54519 | chr2:178565020;178565019;178565018 | chr2:179429747;179429746;179429745 |
Novex-2 | 18165 | 54718;54719;54720 | chr2:178565020;178565019;178565018 | chr2:179429747;179429746;179429745 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs1705165045 | None | 0.036 | N | 0.273 | 0.151 | 0.136095386433 | gnomAD-4.0.0 | 2.05323E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69879E-06 | 0 | 0 |
K/R | None | None | 0.004 | N | 0.27 | 0.132 | 0.17948927462 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.425 | ambiguous | 0.3639 | ambiguous | -0.288 | Destabilizing | 0.25 | N | 0.419 | neutral | None | None | None | None | N |
K/C | 0.6885 | likely_pathogenic | 0.6165 | pathogenic | -0.522 | Destabilizing | 0.992 | D | 0.41 | neutral | None | None | None | None | N |
K/D | 0.7509 | likely_pathogenic | 0.7127 | pathogenic | 0.208 | Stabilizing | 0.617 | D | 0.435 | neutral | None | None | None | None | N |
K/E | 0.2944 | likely_benign | 0.2665 | benign | 0.268 | Stabilizing | 0.379 | N | 0.421 | neutral | N | 0.478576406 | None | None | N |
K/F | 0.8473 | likely_pathogenic | 0.7841 | pathogenic | -0.368 | Destabilizing | 0.92 | D | 0.398 | neutral | None | None | None | None | N |
K/G | 0.6263 | likely_pathogenic | 0.5459 | ambiguous | -0.536 | Destabilizing | 0.617 | D | 0.447 | neutral | None | None | None | None | N |
K/H | 0.3328 | likely_benign | 0.2893 | benign | -0.729 | Destabilizing | 0.977 | D | 0.403 | neutral | None | None | None | None | N |
K/I | 0.3806 | ambiguous | 0.3192 | benign | 0.306 | Stabilizing | 0.681 | D | 0.381 | neutral | N | 0.463225739 | None | None | N |
K/L | 0.4167 | ambiguous | 0.3501 | ambiguous | 0.306 | Stabilizing | 0.447 | N | 0.441 | neutral | None | None | None | None | N |
K/M | 0.2888 | likely_benign | 0.2461 | benign | -0.002 | Destabilizing | 0.92 | D | 0.405 | neutral | None | None | None | None | N |
K/N | 0.5183 | ambiguous | 0.4432 | ambiguous | -0.115 | Destabilizing | 0.81 | D | 0.402 | neutral | N | 0.470029339 | None | None | N |
K/P | 0.8504 | likely_pathogenic | 0.8265 | pathogenic | 0.137 | Stabilizing | 0.92 | D | 0.421 | neutral | None | None | None | None | N |
K/Q | 0.1484 | likely_benign | 0.1334 | benign | -0.174 | Destabilizing | 0.036 | N | 0.273 | neutral | N | 0.510054107 | None | None | N |
K/R | 0.0963 | likely_benign | 0.0894 | benign | -0.161 | Destabilizing | 0.004 | N | 0.27 | neutral | N | 0.500663832 | None | None | N |
K/S | 0.5192 | ambiguous | 0.4493 | ambiguous | -0.69 | Destabilizing | 0.447 | N | 0.389 | neutral | None | None | None | None | N |
K/T | 0.1746 | likely_benign | 0.1523 | benign | -0.447 | Destabilizing | 0.016 | N | 0.262 | neutral | N | 0.465975255 | None | None | N |
K/V | 0.3432 | ambiguous | 0.2888 | benign | 0.137 | Stabilizing | 0.012 | N | 0.3 | neutral | None | None | None | None | N |
K/W | 0.8585 | likely_pathogenic | 0.8003 | pathogenic | -0.346 | Destabilizing | 0.992 | D | 0.519 | neutral | None | None | None | None | N |
K/Y | 0.7344 | likely_pathogenic | 0.6685 | pathogenic | -0.007 | Destabilizing | 0.972 | D | 0.417 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.