Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27041 | 81346;81347;81348 | chr2:178565011;178565010;178565009 | chr2:179429738;179429737;179429736 |
N2AB | 25400 | 76423;76424;76425 | chr2:178565011;178565010;178565009 | chr2:179429738;179429737;179429736 |
N2A | 24473 | 73642;73643;73644 | chr2:178565011;178565010;178565009 | chr2:179429738;179429737;179429736 |
N2B | 17976 | 54151;54152;54153 | chr2:178565011;178565010;178565009 | chr2:179429738;179429737;179429736 |
Novex-1 | 18101 | 54526;54527;54528 | chr2:178565011;178565010;178565009 | chr2:179429738;179429737;179429736 |
Novex-2 | 18168 | 54727;54728;54729 | chr2:178565011;178565010;178565009 | chr2:179429738;179429737;179429736 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/M | rs755178087 | -0.239 | 0.702 | N | 0.448 | 0.188 | 0.361360026772 | gnomAD-2.1.1 | 1.79E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.02648E-04 | None | 0 | None | 0 | 2.35E-05 | 0 |
T/M | rs755178087 | -0.239 | 0.702 | N | 0.448 | 0.188 | 0.361360026772 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93573E-04 | None | 0 | 0 | 0 | 0 | 0 |
T/M | rs755178087 | -0.239 | 0.702 | N | 0.448 | 0.188 | 0.361360026772 | gnomAD-4.0.0 | 6.19947E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 4.45931E-05 | None | 0 | 0 | 5.0867E-06 | 1.09992E-05 | 1.60149E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0658 | likely_benign | 0.0662 | benign | -1.05 | Destabilizing | None | N | 0.059 | neutral | N | 0.477736618 | None | None | N |
T/C | 0.182 | likely_benign | 0.1853 | benign | -0.688 | Destabilizing | None | N | 0.239 | neutral | None | None | None | None | N |
T/D | 0.3796 | ambiguous | 0.3303 | benign | -0.614 | Destabilizing | 0.038 | N | 0.389 | neutral | None | None | None | None | N |
T/E | 0.3055 | likely_benign | 0.2651 | benign | -0.52 | Destabilizing | 0.038 | N | 0.399 | neutral | None | None | None | None | N |
T/F | 0.2032 | likely_benign | 0.1792 | benign | -0.853 | Destabilizing | 0.356 | N | 0.5 | neutral | None | None | None | None | N |
T/G | 0.1691 | likely_benign | 0.171 | benign | -1.4 | Destabilizing | 0.016 | N | 0.333 | neutral | None | None | None | None | N |
T/H | 0.2666 | likely_benign | 0.226 | benign | -1.558 | Destabilizing | 0.356 | N | 0.471 | neutral | None | None | None | None | N |
T/I | 0.13 | likely_benign | 0.1157 | benign | -0.176 | Destabilizing | 0.001 | N | 0.198 | neutral | None | None | None | None | N |
T/K | 0.2967 | likely_benign | 0.2362 | benign | -0.744 | Destabilizing | 0.07 | N | 0.399 | neutral | N | 0.503403067 | None | None | N |
T/L | 0.0834 | likely_benign | 0.0788 | benign | -0.176 | Destabilizing | 0.007 | N | 0.293 | neutral | None | None | None | None | N |
T/M | 0.0755 | likely_benign | 0.072 | benign | -0.014 | Destabilizing | 0.702 | D | 0.448 | neutral | N | 0.476708972 | None | None | N |
T/N | 0.1012 | likely_benign | 0.0959 | benign | -1.005 | Destabilizing | 0.038 | N | 0.355 | neutral | None | None | None | None | N |
T/P | 0.7246 | likely_pathogenic | 0.662 | pathogenic | -0.434 | Destabilizing | 0.055 | N | 0.472 | neutral | D | 0.523819715 | None | None | N |
T/Q | 0.2314 | likely_benign | 0.1977 | benign | -0.992 | Destabilizing | 0.214 | N | 0.475 | neutral | None | None | None | None | N |
T/R | 0.2541 | likely_benign | 0.2002 | benign | -0.678 | Destabilizing | 0.13 | N | 0.479 | neutral | N | 0.510078323 | None | None | N |
T/S | 0.0807 | likely_benign | 0.0813 | benign | -1.306 | Destabilizing | None | N | 0.061 | neutral | N | 0.475408389 | None | None | N |
T/V | 0.0987 | likely_benign | 0.0907 | benign | -0.434 | Destabilizing | None | N | 0.087 | neutral | None | None | None | None | N |
T/W | 0.5401 | ambiguous | 0.5038 | ambiguous | -0.84 | Destabilizing | 0.864 | D | 0.448 | neutral | None | None | None | None | N |
T/Y | 0.2294 | likely_benign | 0.2097 | benign | -0.565 | Destabilizing | 0.356 | N | 0.499 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.