Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2705 | 8338;8339;8340 | chr2:178771214;178771213;178771212 | chr2:179635941;179635940;179635939 |
N2AB | 2705 | 8338;8339;8340 | chr2:178771214;178771213;178771212 | chr2:179635941;179635940;179635939 |
N2A | 2705 | 8338;8339;8340 | chr2:178771214;178771213;178771212 | chr2:179635941;179635940;179635939 |
N2B | 2659 | 8200;8201;8202 | chr2:178771214;178771213;178771212 | chr2:179635941;179635940;179635939 |
Novex-1 | 2659 | 8200;8201;8202 | chr2:178771214;178771213;178771212 | chr2:179635941;179635940;179635939 |
Novex-2 | 2659 | 8200;8201;8202 | chr2:178771214;178771213;178771212 | chr2:179635941;179635940;179635939 |
Novex-3 | 2705 | 8338;8339;8340 | chr2:178771214;178771213;178771212 | chr2:179635941;179635940;179635939 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.999 | N | 0.547 | 0.323 | 0.211220785272 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3454 | ambiguous | 0.4155 | ambiguous | -0.445 | Destabilizing | 0.999 | D | 0.509 | neutral | N | 0.440740568 | None | None | N |
E/C | 0.9714 | likely_pathogenic | 0.9785 | pathogenic | -0.159 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/D | 0.4072 | ambiguous | 0.4729 | ambiguous | -0.6 | Destabilizing | 0.999 | D | 0.433 | neutral | N | 0.362898684 | None | None | N |
E/F | 0.9308 | likely_pathogenic | 0.9488 | pathogenic | -0.223 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
E/G | 0.5075 | ambiguous | 0.5908 | pathogenic | -0.688 | Destabilizing | 1.0 | D | 0.536 | neutral | N | 0.477621434 | None | None | N |
E/H | 0.7858 | likely_pathogenic | 0.8463 | pathogenic | -0.103 | Destabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | N |
E/I | 0.6693 | likely_pathogenic | 0.711 | pathogenic | 0.174 | Stabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/K | 0.3399 | likely_benign | 0.431 | ambiguous | 0.1 | Stabilizing | 0.999 | D | 0.547 | neutral | N | 0.322675325 | None | None | N |
E/L | 0.694 | likely_pathogenic | 0.7475 | pathogenic | 0.174 | Stabilizing | 1.0 | D | 0.654 | neutral | None | None | None | None | N |
E/M | 0.7269 | likely_pathogenic | 0.7662 | pathogenic | 0.278 | Stabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | N |
E/N | 0.622 | likely_pathogenic | 0.6943 | pathogenic | -0.26 | Destabilizing | 1.0 | D | 0.597 | neutral | None | None | None | None | N |
E/P | 0.9657 | likely_pathogenic | 0.9764 | pathogenic | -0.011 | Destabilizing | 1.0 | D | 0.557 | neutral | None | None | None | None | N |
E/Q | 0.2792 | likely_benign | 0.3349 | benign | -0.216 | Destabilizing | 1.0 | D | 0.493 | neutral | N | 0.329701795 | None | None | N |
E/R | 0.5473 | ambiguous | 0.6502 | pathogenic | 0.362 | Stabilizing | 1.0 | D | 0.592 | neutral | None | None | None | None | N |
E/S | 0.4782 | ambiguous | 0.5512 | ambiguous | -0.44 | Destabilizing | 0.999 | D | 0.521 | neutral | None | None | None | None | N |
E/T | 0.4476 | ambiguous | 0.4896 | ambiguous | -0.247 | Destabilizing | 1.0 | D | 0.565 | neutral | None | None | None | None | N |
E/V | 0.4229 | ambiguous | 0.468 | ambiguous | -0.011 | Destabilizing | 1.0 | D | 0.599 | neutral | N | 0.354980159 | None | None | N |
E/W | 0.9807 | likely_pathogenic | 0.9855 | pathogenic | -0.05 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/Y | 0.9068 | likely_pathogenic | 0.933 | pathogenic | 0.024 | Stabilizing | 1.0 | D | 0.62 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.