Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27050 | 81373;81374;81375 | chr2:178564984;178564983;178564982 | chr2:179429711;179429710;179429709 |
N2AB | 25409 | 76450;76451;76452 | chr2:178564984;178564983;178564982 | chr2:179429711;179429710;179429709 |
N2A | 24482 | 73669;73670;73671 | chr2:178564984;178564983;178564982 | chr2:179429711;179429710;179429709 |
N2B | 17985 | 54178;54179;54180 | chr2:178564984;178564983;178564982 | chr2:179429711;179429710;179429709 |
Novex-1 | 18110 | 54553;54554;54555 | chr2:178564984;178564983;178564982 | chr2:179429711;179429710;179429709 |
Novex-2 | 18177 | 54754;54755;54756 | chr2:178564984;178564983;178564982 | chr2:179429711;179429710;179429709 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs938840239 | -0.536 | 1.0 | D | 0.779 | 0.615 | 0.489658423131 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | I | None | 6.48E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/G | rs938840239 | -0.536 | 1.0 | D | 0.779 | 0.615 | 0.489658423131 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs938840239 | -0.536 | 1.0 | D | 0.779 | 0.615 | 0.489658423131 | gnomAD-4.0.0 | 2.56751E-06 | None | None | None | None | I | None | 3.39167E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5817 | likely_pathogenic | 0.5655 | pathogenic | -0.89 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | N | 0.477899243 | None | None | I |
E/C | 0.9708 | likely_pathogenic | 0.9648 | pathogenic | -0.552 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
E/D | 0.9065 | likely_pathogenic | 0.8788 | pathogenic | -1.436 | Destabilizing | 0.999 | D | 0.474 | neutral | D | 0.522060699 | None | None | I |
E/F | 0.9855 | likely_pathogenic | 0.9857 | pathogenic | -0.983 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | I |
E/G | 0.7297 | likely_pathogenic | 0.7099 | pathogenic | -1.223 | Destabilizing | 1.0 | D | 0.779 | deleterious | D | 0.533581588 | None | None | I |
E/H | 0.9592 | likely_pathogenic | 0.953 | pathogenic | -1.204 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
E/I | 0.856 | likely_pathogenic | 0.853 | pathogenic | 0.013 | Stabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | I |
E/K | 0.7009 | likely_pathogenic | 0.7032 | pathogenic | -0.622 | Destabilizing | 0.999 | D | 0.572 | neutral | N | 0.478254865 | None | None | I |
E/L | 0.9253 | likely_pathogenic | 0.9269 | pathogenic | 0.013 | Stabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | I |
E/M | 0.8465 | likely_pathogenic | 0.8451 | pathogenic | 0.554 | Stabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
E/N | 0.9249 | likely_pathogenic | 0.9133 | pathogenic | -0.981 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
E/P | 0.9987 | likely_pathogenic | 0.9986 | pathogenic | -0.268 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | I |
E/Q | 0.334 | likely_benign | 0.3288 | benign | -0.872 | Destabilizing | 1.0 | D | 0.631 | neutral | N | 0.469429774 | None | None | I |
E/R | 0.8186 | likely_pathogenic | 0.8284 | pathogenic | -0.592 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
E/S | 0.7457 | likely_pathogenic | 0.7138 | pathogenic | -1.383 | Destabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | I |
E/T | 0.7725 | likely_pathogenic | 0.7574 | pathogenic | -1.08 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
E/V | 0.6346 | likely_pathogenic | 0.6366 | pathogenic | -0.268 | Destabilizing | 1.0 | D | 0.833 | deleterious | N | 0.479818839 | None | None | I |
E/W | 0.9962 | likely_pathogenic | 0.9964 | pathogenic | -0.975 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
E/Y | 0.9814 | likely_pathogenic | 0.9802 | pathogenic | -0.746 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.