Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27055 | 81388;81389;81390 | chr2:178564969;178564968;178564967 | chr2:179429696;179429695;179429694 |
N2AB | 25414 | 76465;76466;76467 | chr2:178564969;178564968;178564967 | chr2:179429696;179429695;179429694 |
N2A | 24487 | 73684;73685;73686 | chr2:178564969;178564968;178564967 | chr2:179429696;179429695;179429694 |
N2B | 17990 | 54193;54194;54195 | chr2:178564969;178564968;178564967 | chr2:179429696;179429695;179429694 |
Novex-1 | 18115 | 54568;54569;54570 | chr2:178564969;178564968;178564967 | chr2:179429696;179429695;179429694 |
Novex-2 | 18182 | 54769;54770;54771 | chr2:178564969;178564968;178564967 | chr2:179429696;179429695;179429694 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.324 | N | 0.503 | 0.239 | 0.166414681773 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
K/N | None | None | 0.627 | N | 0.584 | 0.109 | 0.159798565429 | gnomAD-4.0.0 | 1.59565E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77469E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6367 | likely_pathogenic | 0.6031 | pathogenic | -0.55 | Destabilizing | 0.116 | N | 0.489 | neutral | None | None | None | None | I |
K/C | 0.7492 | likely_pathogenic | 0.7105 | pathogenic | -0.652 | Destabilizing | 0.981 | D | 0.652 | neutral | None | None | None | None | I |
K/D | 0.9097 | likely_pathogenic | 0.9082 | pathogenic | 0.243 | Stabilizing | 0.69 | D | 0.59 | neutral | None | None | None | None | I |
K/E | 0.4116 | ambiguous | 0.4218 | ambiguous | 0.344 | Stabilizing | 0.324 | N | 0.503 | neutral | N | 0.480960564 | None | None | I |
K/F | 0.8871 | likely_pathogenic | 0.8739 | pathogenic | -0.377 | Destabilizing | 0.69 | D | 0.662 | neutral | None | None | None | None | I |
K/G | 0.7903 | likely_pathogenic | 0.7734 | pathogenic | -0.861 | Destabilizing | 0.002 | N | 0.439 | neutral | None | None | None | None | I |
K/H | 0.5132 | ambiguous | 0.4717 | ambiguous | -0.955 | Destabilizing | 0.981 | D | 0.585 | neutral | None | None | None | None | I |
K/I | 0.3978 | ambiguous | 0.398 | ambiguous | 0.235 | Stabilizing | 0.193 | N | 0.645 | neutral | N | 0.453950108 | None | None | I |
K/L | 0.5122 | ambiguous | 0.4945 | ambiguous | 0.235 | Stabilizing | 0.043 | N | 0.561 | neutral | None | None | None | None | I |
K/M | 0.3512 | ambiguous | 0.338 | benign | -0.046 | Destabilizing | 0.043 | N | 0.474 | neutral | None | None | None | None | I |
K/N | 0.7293 | likely_pathogenic | 0.7265 | pathogenic | -0.258 | Destabilizing | 0.627 | D | 0.584 | neutral | N | 0.469785395 | None | None | I |
K/P | 0.8488 | likely_pathogenic | 0.8428 | pathogenic | 0.002 | Stabilizing | 0.818 | D | 0.617 | neutral | None | None | None | None | I |
K/Q | 0.2096 | likely_benign | 0.19 | benign | -0.294 | Destabilizing | 0.627 | D | 0.613 | neutral | N | 0.467610051 | None | None | I |
K/R | 0.0933 | likely_benign | 0.0901 | benign | -0.275 | Destabilizing | 0.324 | N | 0.568 | neutral | N | 0.452237954 | None | None | I |
K/S | 0.723 | likely_pathogenic | 0.7008 | pathogenic | -0.955 | Destabilizing | 0.241 | N | 0.461 | neutral | None | None | None | None | I |
K/T | 0.3504 | ambiguous | 0.3361 | benign | -0.647 | Destabilizing | 0.006 | N | 0.357 | neutral | N | 0.456566338 | None | None | I |
K/V | 0.397 | ambiguous | 0.3779 | ambiguous | 0.002 | Stabilizing | 0.002 | N | 0.461 | neutral | None | None | None | None | I |
K/W | 0.8927 | likely_pathogenic | 0.8826 | pathogenic | -0.26 | Destabilizing | 0.981 | D | 0.673 | neutral | None | None | None | None | I |
K/Y | 0.7862 | likely_pathogenic | 0.7697 | pathogenic | 0.027 | Stabilizing | 0.818 | D | 0.658 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.